| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_2045 |
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| Symbol | |
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| ID | 5162944 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter uraniireducens Rf4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009483 |
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| Strand | - |
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| Start bp | 2390853 |
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| End bp | 2394092 |
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| Gene Length | 3240 bp |
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| Protein Length | 1079 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640549540 |
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| Product | putative GAF sensor protein |
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| Protein accession | YP_001230808 |
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| Protein GI | 148264102 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription
[R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG0591] Na+/proline symporter
[COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0456906 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGAGCA TCAAACTGGT CATCGGGGTC TCCCTCCTTT ACATATTTTT CCTCTTCCTG
ATCGCTTACT ACGCTGACAA GAAGCAGGAG AAGGGTAAAA GCATCATCTC CAACCCCTAT
ATCTATTCCC TTTCCATCGC TGTTTATGCT ACCACATGGA CCTATTACGG CAGCGTCGGG
AAGGCTGCCA CAACCGGTCT CGATTTTCTT CTCGTATATC TTGGCCCCAC ACTCACCGCA
TTTTCCTGGT GGTTCCTGCT GCGCAAGATT GTGCGAATCG CCAAGGAAAA CAACATCACC
TCCATAGCCG ACTTTATCAG CTCGCGCTAC GGGAAATCGC AATGGCTCGG GGCACTGGTT
ACCATCATCA TCATCCTCGG CATAACACCT TATATAGCTG TGCAGCTCAA GGCGGTAACC
ACAACCTTTG ACATCATCTG CGGTCACCCG TCGGTCCAGC TCCCACTGAT GCAGGGCCGT
TCCCCATTGA CATTCCAAAC AGGCTTTTTT GCCGCGCTGA TACTCAGCAC CTTTGCCGTA
ATCTTCGGCG CTCGGCGCCT GGTTTCTTCA GAGCGACATG AAGGGCTCGT GGCGGCCATA
GCAGTGGAAT CGATCGTAAA GCTCGGGGCT TATTTACTGG TCGGCTTATT TACTACCTAT
ATTCTTTTTG ACGGTTTTGA AGACATTTTT TCCCGGATGA ATGCAAACCA GGTACTCCTC
AACCGCCTGA CAACCTTCGG TGAACCAGGG GAAATCTCCT ATGCAAACTG GTTCACCATG
CTCTACCTCT CCATGGGAGC CATCATGTTG CTCCCCCGTC AGTTTCACAT CATGGTCATC
GAAAACTCCA ACGAGGAGCA TATAAAAAAG GCCATGTGGC TGTTCCCCGT CTACATGTTT
TTGATAAACT TCTTTGTCAT GCCCATCGCC CTGGGAGGAA TCCTCTTTAC CGGCAACAGC
GCCAATGCCG ATTATTTTGT TCTCACCCTC CCCTTGCTGA GCGGTCATTC CTGGCTGGCA
TTGATCGCTT TTCTTGGTGG TTTTTCCGCC GCAGCCGGGA TGGTTATGGT CGAATCCGTT
GCAATTTCCA CCATGTTTCT CAACCACCTG ATCATGCCGG TCGTGGTCAG GCTGAAACCG
CGAAGCTGGT TCCCGGTTCT GCTCATCAAC ATGAAGCGCT TCGGCATCTT CCTGGTCGTC
TTACTCGGAT ATTTTTACCA GAACATCGTT GGCGAAACCT ATATGCTGGT CACCATGGGG
CTCATGTCTT TTGCCGCCGC CGCCCAGTTC GGCCCCGCTC TGATCGGCGG GCTCTACTGG
CACAGGGGAA ACAAGGCCGG GGCAATAACC GGCATGCTCC TCGGCTTCAT AATCTGGTTT
TACACCTTGC TCGTCCCTTC CTTTGTGAAA TCAGGATGGT GGCAAAGCGA TATTCTGACA
AAAGGGCCCT TCGGTCTGGA CTTTTTGAGA CCCACACAAC TTTTCGGTCT TGTCGGCTTT
GATATCTGGA GCCACTCCCT GTTCTGGAGC ATGCTGTTCA ATATCGGCGC TTATCTGGCA
CTTTCCATCA TATTGGGCCA GGATGAACGT GAACAGGAGC AGGTAAAAAG ATTCGTTGAC
GTTTTTGAAC CGGAGCAAAT CAAGATGCCG TGGGAAACGA AGCGGCTCTC GAAACCGGTA
ACGATCCTGC AATTTGTAAA TCTCATGACA AAATTCATCG GAGAAACTCA GGCCCACTCC
GCCATAAGTG AATACCTGGG AAACAGGGAA ATCGACGGAA AAGGCGGAGT GTCGGAGTTT
GAACTGCCGA ATCTCAAACG ATTTATCGAG AAAACACTGG CCGGTTCTCT GGGCGCAGCA
GCTGCCGGAG CCATCGTCGA AAGCTACCTG AGCGACATCG GCTCAAAAAT GGAGTCCGTG
TACGACATCT TCAGCACAGT CCGCACCTCA CTCGACCAGA GTCGGGAAGC GCTTTACGTC
AGACTACGGG CTTCGGAAAT CATGAACCGG TCCCTCGACC TGCAGATCAT CATGGAAGAT
CTCCTTGAAT TGCTCCGTAA GGAATTCAAG TTTGATCTGG CCGTTATCAG GCTGGTGGAT
GAACAGGGAA TTTTAACCGT CCGTTGTTAC CGCGGCACAG GAAACCAGCA GATTACCCGA
CACGGCAGGC TGCCGGAAAT CGACACCCAC ATAGGTGAAG CATTCCTGGG CAATAGAGCG
GAATTCGTCA ATGACACGCA GTATCTTACC AAACCCAAGT CTAAAGAAAT CATGGAGCAC
GAAGGAATAA AGTCATTCGC CCATATCCCT ATCGCCAGTG AAGGGGACCC CCCGATGGGG
ATTCTCTCGG TATTCTCAAA GTCGATAGTG GGCCTTTTCA CCGAACCGTT CCTTCAGCTT
CTCGGCAGTC TTGCCGGACA ATTGGCTCAG GCGGTAAAGA TCGTCTCTGA ACGGGAAGCC
AAGGAAAAGG AACGACAGCA AAAAGAAGAA GCCCTGCTGG AAAACGCCAG AGTGCTCAGA
GATATGGAAA TTGCAAAGCA GATACAACTT TCGCTCCTGC CGGCTTCGTT CCCATATTTG
CCCGGCGTTC GTTTTGCCTG CTACTGTGTA CCTGCAGCCC ATGTGGGAGG CGACTATTAT
GACTACTTTC TGCGCGGTGA AAACGATATC GACATGATCA TAGCCGATGT GTCAGGTCAC
AGCGTCGGAG CTGCATTGAT AATGGTTGAA ACGCGCAGCG TTCTGCGGGC TCAAGTACAT
TCGACGACTT CCTGTACCGA TATACTTTCC GTCCTCAACG ACCTTCTCTA CGAAGATCTG
ACCAGAGCCG AACTCTTCAT TACCATGTTT TATGCGAATT ACAACGCAGA AAGCCGCGTC
CTCAACTATG CCAACGCCGG CCACAATCCC CCCATCCTTC TCCGACGTGG AAAGTTGGCC
TGCACCGAAC TGGACGCAGA AGGTCTTATT CTTGGAGTCA ACCGTGCTGT CTCCTTTGAA
GGAAAGAGTA TCCAATTGCA GAAAGGTGAC TTGGTACTTT TCTACACTGA TGGAATTATT
GAAGCACAAA CTGTAACTGG GGAATTATTC GGCACAGAAA GGCTCTGCAC TGTTTTGACT
GAAGTTTTTG AAAATGAGCC CCAGAAAATT ATCGAGAGGA TCTTTAAGGA GGTAACGGAA
TATACTTCAT CCACTTTGCT GCAGGACGAT ATTTCCATGG TTGTCATGAA AGTAGATTGA
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| Protein sequence | MLSIKLVIGV SLLYIFFLFL IAYYADKKQE KGKSIISNPY IYSLSIAVYA TTWTYYGSVG
KAATTGLDFL LVYLGPTLTA FSWWFLLRKI VRIAKENNIT SIADFISSRY GKSQWLGALV
TIIIILGITP YIAVQLKAVT TTFDIICGHP SVQLPLMQGR SPLTFQTGFF AALILSTFAV
IFGARRLVSS ERHEGLVAAI AVESIVKLGA YLLVGLFTTY ILFDGFEDIF SRMNANQVLL
NRLTTFGEPG EISYANWFTM LYLSMGAIML LPRQFHIMVI ENSNEEHIKK AMWLFPVYMF
LINFFVMPIA LGGILFTGNS ANADYFVLTL PLLSGHSWLA LIAFLGGFSA AAGMVMVESV
AISTMFLNHL IMPVVVRLKP RSWFPVLLIN MKRFGIFLVV LLGYFYQNIV GETYMLVTMG
LMSFAAAAQF GPALIGGLYW HRGNKAGAIT GMLLGFIIWF YTLLVPSFVK SGWWQSDILT
KGPFGLDFLR PTQLFGLVGF DIWSHSLFWS MLFNIGAYLA LSIILGQDER EQEQVKRFVD
VFEPEQIKMP WETKRLSKPV TILQFVNLMT KFIGETQAHS AISEYLGNRE IDGKGGVSEF
ELPNLKRFIE KTLAGSLGAA AAGAIVESYL SDIGSKMESV YDIFSTVRTS LDQSREALYV
RLRASEIMNR SLDLQIIMED LLELLRKEFK FDLAVIRLVD EQGILTVRCY RGTGNQQITR
HGRLPEIDTH IGEAFLGNRA EFVNDTQYLT KPKSKEIMEH EGIKSFAHIP IASEGDPPMG
ILSVFSKSIV GLFTEPFLQL LGSLAGQLAQ AVKIVSEREA KEKERQQKEE ALLENARVLR
DMEIAKQIQL SLLPASFPYL PGVRFACYCV PAAHVGGDYY DYFLRGENDI DMIIADVSGH
SVGAALIMVE TRSVLRAQVH STTSCTDILS VLNDLLYEDL TRAELFITMF YANYNAESRV
LNYANAGHNP PILLRRGKLA CTELDAEGLI LGVNRAVSFE GKSIQLQKGD LVLFYTDGII
EAQTVTGELF GTERLCTVLT EVFENEPQKI IERIFKEVTE YTSSTLLQDD ISMVVMKVD
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