Gene Gura_2045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGura_2045 
Symbol 
ID5162944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter uraniireducens Rf4 
KingdomBacteria 
Replicon accessionNC_009483 
Strand
Start bp2390853 
End bp2394092 
Gene Length3240 bp 
Protein Length1079 aa 
Translation table11 
GC content50% 
IMG OID640549540 
Productputative GAF sensor protein 
Protein accessionYP_001230808 
Protein GI148264102 
COG category[E] Amino acid transport and metabolism
[K] Transcription
[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG0591] Na+/proline symporter
[COG2208] Serine phosphatase RsbU, regulator of sigma subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0456906 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGAGCA TCAAACTGGT CATCGGGGTC TCCCTCCTTT ACATATTTTT CCTCTTCCTG 
ATCGCTTACT ACGCTGACAA GAAGCAGGAG AAGGGTAAAA GCATCATCTC CAACCCCTAT
ATCTATTCCC TTTCCATCGC TGTTTATGCT ACCACATGGA CCTATTACGG CAGCGTCGGG
AAGGCTGCCA CAACCGGTCT CGATTTTCTT CTCGTATATC TTGGCCCCAC ACTCACCGCA
TTTTCCTGGT GGTTCCTGCT GCGCAAGATT GTGCGAATCG CCAAGGAAAA CAACATCACC
TCCATAGCCG ACTTTATCAG CTCGCGCTAC GGGAAATCGC AATGGCTCGG GGCACTGGTT
ACCATCATCA TCATCCTCGG CATAACACCT TATATAGCTG TGCAGCTCAA GGCGGTAACC
ACAACCTTTG ACATCATCTG CGGTCACCCG TCGGTCCAGC TCCCACTGAT GCAGGGCCGT
TCCCCATTGA CATTCCAAAC AGGCTTTTTT GCCGCGCTGA TACTCAGCAC CTTTGCCGTA
ATCTTCGGCG CTCGGCGCCT GGTTTCTTCA GAGCGACATG AAGGGCTCGT GGCGGCCATA
GCAGTGGAAT CGATCGTAAA GCTCGGGGCT TATTTACTGG TCGGCTTATT TACTACCTAT
ATTCTTTTTG ACGGTTTTGA AGACATTTTT TCCCGGATGA ATGCAAACCA GGTACTCCTC
AACCGCCTGA CAACCTTCGG TGAACCAGGG GAAATCTCCT ATGCAAACTG GTTCACCATG
CTCTACCTCT CCATGGGAGC CATCATGTTG CTCCCCCGTC AGTTTCACAT CATGGTCATC
GAAAACTCCA ACGAGGAGCA TATAAAAAAG GCCATGTGGC TGTTCCCCGT CTACATGTTT
TTGATAAACT TCTTTGTCAT GCCCATCGCC CTGGGAGGAA TCCTCTTTAC CGGCAACAGC
GCCAATGCCG ATTATTTTGT TCTCACCCTC CCCTTGCTGA GCGGTCATTC CTGGCTGGCA
TTGATCGCTT TTCTTGGTGG TTTTTCCGCC GCAGCCGGGA TGGTTATGGT CGAATCCGTT
GCAATTTCCA CCATGTTTCT CAACCACCTG ATCATGCCGG TCGTGGTCAG GCTGAAACCG
CGAAGCTGGT TCCCGGTTCT GCTCATCAAC ATGAAGCGCT TCGGCATCTT CCTGGTCGTC
TTACTCGGAT ATTTTTACCA GAACATCGTT GGCGAAACCT ATATGCTGGT CACCATGGGG
CTCATGTCTT TTGCCGCCGC CGCCCAGTTC GGCCCCGCTC TGATCGGCGG GCTCTACTGG
CACAGGGGAA ACAAGGCCGG GGCAATAACC GGCATGCTCC TCGGCTTCAT AATCTGGTTT
TACACCTTGC TCGTCCCTTC CTTTGTGAAA TCAGGATGGT GGCAAAGCGA TATTCTGACA
AAAGGGCCCT TCGGTCTGGA CTTTTTGAGA CCCACACAAC TTTTCGGTCT TGTCGGCTTT
GATATCTGGA GCCACTCCCT GTTCTGGAGC ATGCTGTTCA ATATCGGCGC TTATCTGGCA
CTTTCCATCA TATTGGGCCA GGATGAACGT GAACAGGAGC AGGTAAAAAG ATTCGTTGAC
GTTTTTGAAC CGGAGCAAAT CAAGATGCCG TGGGAAACGA AGCGGCTCTC GAAACCGGTA
ACGATCCTGC AATTTGTAAA TCTCATGACA AAATTCATCG GAGAAACTCA GGCCCACTCC
GCCATAAGTG AATACCTGGG AAACAGGGAA ATCGACGGAA AAGGCGGAGT GTCGGAGTTT
GAACTGCCGA ATCTCAAACG ATTTATCGAG AAAACACTGG CCGGTTCTCT GGGCGCAGCA
GCTGCCGGAG CCATCGTCGA AAGCTACCTG AGCGACATCG GCTCAAAAAT GGAGTCCGTG
TACGACATCT TCAGCACAGT CCGCACCTCA CTCGACCAGA GTCGGGAAGC GCTTTACGTC
AGACTACGGG CTTCGGAAAT CATGAACCGG TCCCTCGACC TGCAGATCAT CATGGAAGAT
CTCCTTGAAT TGCTCCGTAA GGAATTCAAG TTTGATCTGG CCGTTATCAG GCTGGTGGAT
GAACAGGGAA TTTTAACCGT CCGTTGTTAC CGCGGCACAG GAAACCAGCA GATTACCCGA
CACGGCAGGC TGCCGGAAAT CGACACCCAC ATAGGTGAAG CATTCCTGGG CAATAGAGCG
GAATTCGTCA ATGACACGCA GTATCTTACC AAACCCAAGT CTAAAGAAAT CATGGAGCAC
GAAGGAATAA AGTCATTCGC CCATATCCCT ATCGCCAGTG AAGGGGACCC CCCGATGGGG
ATTCTCTCGG TATTCTCAAA GTCGATAGTG GGCCTTTTCA CCGAACCGTT CCTTCAGCTT
CTCGGCAGTC TTGCCGGACA ATTGGCTCAG GCGGTAAAGA TCGTCTCTGA ACGGGAAGCC
AAGGAAAAGG AACGACAGCA AAAAGAAGAA GCCCTGCTGG AAAACGCCAG AGTGCTCAGA
GATATGGAAA TTGCAAAGCA GATACAACTT TCGCTCCTGC CGGCTTCGTT CCCATATTTG
CCCGGCGTTC GTTTTGCCTG CTACTGTGTA CCTGCAGCCC ATGTGGGAGG CGACTATTAT
GACTACTTTC TGCGCGGTGA AAACGATATC GACATGATCA TAGCCGATGT GTCAGGTCAC
AGCGTCGGAG CTGCATTGAT AATGGTTGAA ACGCGCAGCG TTCTGCGGGC TCAAGTACAT
TCGACGACTT CCTGTACCGA TATACTTTCC GTCCTCAACG ACCTTCTCTA CGAAGATCTG
ACCAGAGCCG AACTCTTCAT TACCATGTTT TATGCGAATT ACAACGCAGA AAGCCGCGTC
CTCAACTATG CCAACGCCGG CCACAATCCC CCCATCCTTC TCCGACGTGG AAAGTTGGCC
TGCACCGAAC TGGACGCAGA AGGTCTTATT CTTGGAGTCA ACCGTGCTGT CTCCTTTGAA
GGAAAGAGTA TCCAATTGCA GAAAGGTGAC TTGGTACTTT TCTACACTGA TGGAATTATT
GAAGCACAAA CTGTAACTGG GGAATTATTC GGCACAGAAA GGCTCTGCAC TGTTTTGACT
GAAGTTTTTG AAAATGAGCC CCAGAAAATT ATCGAGAGGA TCTTTAAGGA GGTAACGGAA
TATACTTCAT CCACTTTGCT GCAGGACGAT ATTTCCATGG TTGTCATGAA AGTAGATTGA
 
Protein sequence
MLSIKLVIGV SLLYIFFLFL IAYYADKKQE KGKSIISNPY IYSLSIAVYA TTWTYYGSVG 
KAATTGLDFL LVYLGPTLTA FSWWFLLRKI VRIAKENNIT SIADFISSRY GKSQWLGALV
TIIIILGITP YIAVQLKAVT TTFDIICGHP SVQLPLMQGR SPLTFQTGFF AALILSTFAV
IFGARRLVSS ERHEGLVAAI AVESIVKLGA YLLVGLFTTY ILFDGFEDIF SRMNANQVLL
NRLTTFGEPG EISYANWFTM LYLSMGAIML LPRQFHIMVI ENSNEEHIKK AMWLFPVYMF
LINFFVMPIA LGGILFTGNS ANADYFVLTL PLLSGHSWLA LIAFLGGFSA AAGMVMVESV
AISTMFLNHL IMPVVVRLKP RSWFPVLLIN MKRFGIFLVV LLGYFYQNIV GETYMLVTMG
LMSFAAAAQF GPALIGGLYW HRGNKAGAIT GMLLGFIIWF YTLLVPSFVK SGWWQSDILT
KGPFGLDFLR PTQLFGLVGF DIWSHSLFWS MLFNIGAYLA LSIILGQDER EQEQVKRFVD
VFEPEQIKMP WETKRLSKPV TILQFVNLMT KFIGETQAHS AISEYLGNRE IDGKGGVSEF
ELPNLKRFIE KTLAGSLGAA AAGAIVESYL SDIGSKMESV YDIFSTVRTS LDQSREALYV
RLRASEIMNR SLDLQIIMED LLELLRKEFK FDLAVIRLVD EQGILTVRCY RGTGNQQITR
HGRLPEIDTH IGEAFLGNRA EFVNDTQYLT KPKSKEIMEH EGIKSFAHIP IASEGDPPMG
ILSVFSKSIV GLFTEPFLQL LGSLAGQLAQ AVKIVSEREA KEKERQQKEE ALLENARVLR
DMEIAKQIQL SLLPASFPYL PGVRFACYCV PAAHVGGDYY DYFLRGENDI DMIIADVSGH
SVGAALIMVE TRSVLRAQVH STTSCTDILS VLNDLLYEDL TRAELFITMF YANYNAESRV
LNYANAGHNP PILLRRGKLA CTELDAEGLI LGVNRAVSFE GKSIQLQKGD LVLFYTDGII
EAQTVTGELF GTERLCTVLT EVFENEPQKI IERIFKEVTE YTSSTLLQDD ISMVVMKVD