Gene Gura_2037 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGura_2037 
Symbol 
ID5166107 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter uraniireducens Rf4 
KingdomBacteria 
Replicon accessionNC_009483 
Strand
Start bp2383743 
End bp2384495 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content55% 
IMG OID640549532 
Producthemolysin A 
Protein accessionYP_001230800 
Protein GI148264094 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1189] Predicted rRNA methylase 
TIGRFAM ID[TIGR00478] hemolysin TlyA family protein 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00330226 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCTAAAG AGAGACTCGA TAAAATCCTG CTGGACCGTG GGCTGGCGCA ATCCCGCGAG 
CGGGCGAAGG CGCTGATAAT GGCCGGCCAG GTAGTGGTGG ACGACCACCT TGCTGACAAG
GCCGGGCAGA TGGTCGCGCT TGAAGCTGAG ATTCGGTTGA AAGGAGAGGT TCATCCATTT
GTCAGTCGCG GCGGCCTTAA GCTGCAAAAG GCGCTCGATG AGTTTGCCAT CGACGTGAAC
GGTCTTGTGG TCATGGATGT GGGCGCATCC ACCGGCGGAT TTACCGATTG CCTGCTGCAA
CGGGGGGCAA AAAAGATTTT TGCCGTCGAC GTCGGGTATG GGCAGCTTGC CTGGAAACTC
CGCCAGGATG AACGGGTCGT GAATCTGGAA AAGACCAACA TTCGCTACCT GGAGCCGGAT
AGGCTTGAGG AGATACCCGA CATGGCTGTC ATCGACGCAT CGTTCATCTC TCTTGACAAG
GTTCTCCCCG CAACGATCCG CCTGATAAGC GATACCGGAG TCGTGGTTGC CCTGATTAAG
CCCCAGTTTG AGGTGGGACG TGGCGAAGTG GGGAAGGGTG GGGTGGTGCG TGATGAAAAA
AAACATGCCG AGGTGATTTC TGCCATAACT GTCTTGGCTG CAGATCTGGA CCTGACCATC
AAGGGTATTA CCGAATCGCC GATTTTGGGG CCTAAGGGGA ACAAGGAATT TCTCATTTAT
CTGGAGAAAA AGGGACGGTC GACGTGTGAG TGA
 
Protein sequence
MAKERLDKIL LDRGLAQSRE RAKALIMAGQ VVVDDHLADK AGQMVALEAE IRLKGEVHPF 
VSRGGLKLQK ALDEFAIDVN GLVVMDVGAS TGGFTDCLLQ RGAKKIFAVD VGYGQLAWKL
RQDERVVNLE KTNIRYLEPD RLEEIPDMAV IDASFISLDK VLPATIRLIS DTGVVVALIK
PQFEVGRGEV GKGGVVRDEK KHAEVISAIT VLAADLDLTI KGITESPILG PKGNKEFLIY
LEKKGRSTCE