| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_2013 |
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| Symbol | |
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| ID | 5164640 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter uraniireducens Rf4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009483 |
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| Strand | - |
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| Start bp | 2343863 |
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| End bp | 2345527 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640549507 |
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| Product | 2-nitropropane dioxygenase, NPD |
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| Protein accession | YP_001230776 |
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| Protein GI | 148264070 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
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| TIGRFAM ID | [TIGR02814] PfaD family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAACCAGT TTCAGCCAAG GAATGACTCT GTCAGTCATC CCTCGGAACA TGCCTGCCTC
GGCTGGTGGT GCTCCGATTC ATCGCTTTCA ACCGCTCCTG ACAAGACCCT GAGGGAGTCG
CTTCGTCTGG TCCGCCTCCC TCTCTATCTG GTGAGCAACG GCAGCAGCGT TGTCGCGAAG
TCCGGCGGAA GCGGACTGTT CGGCGGAGTA AAACCGGAAG ACGACAGCCA CCCCATCATC
GGATATGCCC CGCCATGCCT GCCGGAACGG CTCGGCGACC AGGGATTCTG CGCCGACCTC
GGACTCCGTT TCCCTTACAT CGGCGGCTCC ATGGCCAAGG GAATCAGTTC TGCGGCAATG
GCGGAAGAAC TGGGACGCGA AGGAATGCTC GGCTTCTTCG GTGCCGCAGG TTTACCGTTC
GCCACTGTGG AGGCTGCCAT CGGCCGCCTC GCCGGCAACA AATTCCCTTA CGGCTTCAAC
CTCATCCATT CCCCCCAAGA GCCTGACATG GAGGACGCAC TCTCGCGTCT TTACATGGAG
AAGGGGGTAC GACTCGTAGA GGCTTCGGCC TTCCTCGCCC TGACACTCCC CCTGGTCCGC
TATCGCGTCC ATGGAATTCA CCGTTCCCCT GACGGCGCCA TCGTCGCCCC GAACCGGATC
ATTGCCAAGG TTTCCCGCGA AGAGCTGGCC GCCAGGTTTT TCTCCCCCCC GCCCGAGAAG
TTCCTCAGAG AGCTGGTCGC AAGCGGAGAG ATCACTCCGG CTCAGGCGGA GATGGCCGCG
CAAATTCCCA TGGCCCAGGA TGTTACCGCC GAGGCCGATT CGGGCGGACA CACCGACAAC
CGTCCGGCCA TTGCCCTTTT TCCCACCATC CTCTCCCTGG CATCCCAACT TGAAGCGAGT
TACGGCTACA AGCAGAAACT CCGCGTCGGT CTTGCCGGCG GCATCTCCAC CCCTGCCGCG
GCCGCTGCCG CCTTTGCCAT GGGAGCTGCA TACATCATGA CCGGCTCGGT CAATCAGGCC
TGCATCGAGT CCGGCACCTG CGACGAGGTG CGCAACATGC TCGCAGAAAC CCGTCAGGCC
GATGTGACCA TGGCCCCGGC CGCCGACATG TTCGAGATGG GGGTGACGGT ACAGGTGCTG
AAGCGGGGGA CCATGTTCCC CATGCGTGCC GCAAAGCTCT ATGAAATTTA CCGCACGTAC
GGCAGCATGG AGGATATTCC CCCTGCCGAG CGGGAGAAGC TGGAGCAGAC CATGTTCCGC
GCTCCGCTCA ATGATATCTG GCGGGATACC CGCTCCTACT TCCTGCGCCG CGACCCGCGC
CAGGCAGAGC GTGGAGATCG GGATCCCAAG CACCGGATGG CCCTCGTCTT CCGCTGGTAT
CTTGGTCAGG CGGCCCACTG GGCCAAGGAC GGCGAATCGT CCCGCAAGAT CGACTACCAG
GTATGGTGCG GACCTGCCAT GGGCGCATTT AACGAATGGG CAAGCGGCTC AGGCCTTGAA
TCCCCCTCCC GGCGAAAAGT CGTAACGGTT GCCCTCAACA TTCTTCATGG CGCCGCGGTG
CTCACCCGCG CCAATTTCCT CCGCTGCCAG GGTATCCGCC TCGCGCCGGA GGAGACGCGC
ATAGAACCGC TCGAAATTGC ACAGATCAAG GAGTACCTCA GGTGA
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| Protein sequence | MNQFQPRNDS VSHPSEHACL GWWCSDSSLS TAPDKTLRES LRLVRLPLYL VSNGSSVVAK
SGGSGLFGGV KPEDDSHPII GYAPPCLPER LGDQGFCADL GLRFPYIGGS MAKGISSAAM
AEELGREGML GFFGAAGLPF ATVEAAIGRL AGNKFPYGFN LIHSPQEPDM EDALSRLYME
KGVRLVEASA FLALTLPLVR YRVHGIHRSP DGAIVAPNRI IAKVSREELA ARFFSPPPEK
FLRELVASGE ITPAQAEMAA QIPMAQDVTA EADSGGHTDN RPAIALFPTI LSLASQLEAS
YGYKQKLRVG LAGGISTPAA AAAAFAMGAA YIMTGSVNQA CIESGTCDEV RNMLAETRQA
DVTMAPAADM FEMGVTVQVL KRGTMFPMRA AKLYEIYRTY GSMEDIPPAE REKLEQTMFR
APLNDIWRDT RSYFLRRDPR QAERGDRDPK HRMALVFRWY LGQAAHWAKD GESSRKIDYQ
VWCGPAMGAF NEWASGSGLE SPSRRKVVTV ALNILHGAAV LTRANFLRCQ GIRLAPEETR
IEPLEIAQIK EYLR
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