Gene Gura_1979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGura_1979 
Symbol 
ID5166996 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter uraniireducens Rf4 
KingdomBacteria 
Replicon accessionNC_009483 
Strand
Start bp2290587 
End bp2291816 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content62% 
IMG OID640549473 
Productnuclease SbcCD, D subunit 
Protein accessionYP_001230742 
Protein GI148264036 
COG category[L] Replication, recombination and repair 
COG ID[COG0420] DNA repair exonuclease 
TIGRFAM ID[TIGR00619] exonuclease SbcD 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATCC TGCATACATC GGATTGGCAC ATAGGGCGGG CGCTGTATGG CCGCAAACGT 
TACGAGGAGT TCGAGCAATT TCTTGACTGG CTGATCGGCT GCATTGAGAC CGAAGGGATC
GAGGCACTGC TTGTTGCCGG TGATGTATTC GACAACGGCA CGCCCAGCAA CCGGGCGTTG
GAGCTCTATT ACCGCTTTCT GTGCCGCGTG GCCGGCGCGG GGTGCAGACA CGTGGTGGTC
ACGGCGGGGA ACCACGATTC CCCTTCGCTC CTCAATGCCC CCCGCGAGGT GTTGCGCCAT
CTCAACGTTC ACGTTGTCGG CTGCATGGCC GAGGCGGCGG ACGAGCTGGT GGTGCTGAAC
GATAGCGACG GCAAACCCGG GCTGATTGTC TGCGCCGTTC CCTATCTGCG CGACCGCGAT
ATTCGCCGGG CCGAGGCCGG AGAAACCTTT GAGGACAAGG GGCGCAAACT GGTGGAGGGG
ATCCGCGACC ACTACCGGCA GGTGGGCGAA GCGGCCGTTG CCAAGCGCTC CGAGTTTGGG
GGGGAGCTCC CCATTATCGC CATGGGGCAC CTTTTCACAA GCGGCGGCCA GACCGTGGAA
GGCGATGGGG TGCGGGAGCT GTATGTGGGA AACCTTGGGC AAGTGCGTGC CGATGTCTTT
CCCGATTGCT TCGACTACCT GGCCCTCGGG CATCTGCATG TGGCGCAGCG GGTAAACGGC
TCGGACGTCC GCCGTTATTC GGGGGCGCCA ATCCCGATGA GCTTCGGCGA GGCCGGGCAA
CGAAAGATCG TGGTGGCGGT TAATGCAGGC ACCGAAGGGG TTACGGTACG GGAAATACCC
GTTCCTGGTT TTCAGTCGCT GGCAACGGTG CGCGGTGACT GGAAGCGTGT CAGCGAGCGT
ATAGCCGCCT TGAAAAAGGA GGCCGTTTCG GTATGGCTGG AGGTGATCTA CGAAGGGGAC
GAGGTCATAG GCGATCTGCA GGAACGCTTG CGCGAGCTGA TCGACGGGAG TGCACTGGAA
ATCCTGCGGG CAAAGAACAT GCGCCTGGTG GAGCGGACCT TGAGCCGGAT GGCGACGGAA
GAGACCCTGG ATGATCTCAC CGTTGACGAT GTGTTCGCCC GTTGCCTCGA CGCCCATGCG
GTGCCGCAGG AACAGCAGGC CGAACTGGTC GCGGCCTTTC GTGAGACAGT TGCCGCATTG
CACGAAGAAG CCACCCTGGG GGAACCATGA
 
Protein sequence
MKILHTSDWH IGRALYGRKR YEEFEQFLDW LIGCIETEGI EALLVAGDVF DNGTPSNRAL 
ELYYRFLCRV AGAGCRHVVV TAGNHDSPSL LNAPREVLRH LNVHVVGCMA EAADELVVLN
DSDGKPGLIV CAVPYLRDRD IRRAEAGETF EDKGRKLVEG IRDHYRQVGE AAVAKRSEFG
GELPIIAMGH LFTSGGQTVE GDGVRELYVG NLGQVRADVF PDCFDYLALG HLHVAQRVNG
SDVRRYSGAP IPMSFGEAGQ RKIVVAVNAG TEGVTVREIP VPGFQSLATV RGDWKRVSER
IAALKKEAVS VWLEVIYEGD EVIGDLQERL RELIDGSALE ILRAKNMRLV ERTLSRMATE
ETLDDLTVDD VFARCLDAHA VPQEQQAELV AAFRETVAAL HEEATLGEP