| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_1834 |
|---|
| Symbol | |
|---|
| ID | 5163390 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter uraniireducens Rf4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009483 |
|---|
| Strand | - |
|---|
| Start bp | 2123595 |
|---|
| End bp | 2128430 |
|---|
| Gene Length | 4836 bp |
|---|
| Protein Length | 1611 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640549325 |
|---|
| Product | cytochrome C family protein |
|---|
| Protein accession | YP_001230597 |
|---|
| Protein GI | 148263891 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01904] Geobacter sulfurreducens CxxxxCH...CXXCH domain
[TIGR01905] doubled CXXCH domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACAGAT TGCATATTAA AAGCCTTGTG ATCGGCATCC TCTGCTTGTT CCCGTCCCTG
GCAACAGCGG TAACAGTCGA TTCGCCCCAT GACACGGCCA ACGGCTATAG CTGCGCAAGC
TGCCATACCT TACATCTGGA CCTGGGGAGC ACCGGCTATA ACAACGTCTG CCTCAACTGC
CACCGTCCGG GGGTGCCGAA GGCCGGAAAC AAACCCTTTA CCCCGGCAGA TTTCGCCAAT
CCGTTCAACA CTTACACGGC AACCCGCACA GGCACGCTCT ACCAGACATC CCACAACTGG
AACGGACCGG ACGAGGTCGA TGAGGCGGGC GCGCAGCCCC CTCAATTCGC CGCCATGACC
TCGACCGGCA CGGGAAACAA GCTGCGTGCC AGGACCGGCG GCAGCCTGGC CTGCGTCCGC
TGTCACAACC AGCATGACAA CACCAACAAG CCTTTCCTGC GCATGGCGAA CGACCGGGAC
CAGATGTGCC TCGACTGCCA CAGGAGCCGA AACCAGCAAA GCCATACGAC CGGCACCCAC
CCGGTAAACT TCAACTATAC GGGCGCAACC TCCAAGGTCA AAACAAACCC GGCACAATTC
AACAACCCGC CGGTGAATGC CAACACGACA AACCCGACCT CCGACCTGAA TGCAAGACTG
ACCCGCACAG GCGGCTCCCT CGTTTGCAGC ACCTGCCACG GTGTCCATTA CAGCGACTCC
AGCAGCGCCA CCTTTGACAA CAATTCCGGC TTCAACGCAC TCAAACCGTC GGACGGCAGC
CTGCTCAGAA CCGATCTGCA CGGCGCAAAT GCCGACGATC TCAACATTTG CACCAACTGC
CATGCCGGCA AGGTGGCCCA TAACGGCAGA AACCAGAACA TCCAGTGTGC CGACTGCCAC
GGCGGCCACG TGGATTTCGA CCCCAATGCC GTAACAGCAC AGCAAAGAAT CCCGAACGTC
TGGCTGGTCA GGCGTTACAT GAACGTCTCG ACTGTCCTGC GCTCCGCAAA AAACAAGCCG
GTCTACTTCC AGTCGACTAC GGTCAAGAAC TACAAGGATG CTTCCGGCAA CGGCGTCTGC
CAATCATGCC ACGACGTTCC GGTCGGCTCA GGTTATCCTG ACGAACACGC TAGGCTCGAC
ACGACGACCT GCAACGCTTG CCACTTCCAC GGCAATACCA AAGGCTCTTT CACAGCCATC
GGCGCATGCA ACACCTGCCA TGGTTATCCG CCCCACGGCA ATAGTGCAGG CGGTCCGAAT
GGGTATGCGG TATTCAACGG CACTCCGTCA CCCTTCACCA ATGAATCCTC CAGCGCCCAC
ATCACCCATT CCGGCGGGAT CGTTTACAGC AAGCAGTGTG TTGACTGCCA CCAGGGTAAT
ACCCACCAGG CCGGCACCTT CCAGGATGTA TTTATCGACA CTACAGGCAG GATCGCTTCC
TCCTTCGGCG CCACTCCCAC CTTCAACGGA ACGCCAGCCA CTGCGCCGAC CTGTTCAAAC
GTCTATTGTC ACAGCGATGG CGCGCCGCGC AATGCGTCTC TTGTGCCGGT GCTGACGACA
AAGACGATCC CCGGCTGGGC GAACGGCAGG GGGGCAATAG TCGGCCAGCC GGATGAATGC
CGGCAGTGTC ACGGCGATGC TACGACGCTT GCCACCAATT CCCACGGCAA GCATCTCGCC
GATTCCATCG GCTGCACTGT CTGTCACAAC GGGACGGTCA GCAGCAACAA CGCCATCAAG
GATTTCAACA CCCATGCCAA TGGCGTCAAG GATGTACGGT TCGGAGGTAC GCTCACTACA
GGCGGCACAT GGACCGTATC TGCTGCCACC TGCTCCGGCA TCTACTGCCA CAGCAATGTG
CAGGGAGCAA ACGGCAATGG TGCGCCAACA GCTTTTGCAT CTCCGGTCTG GGGGAGCGTG
ACCATTACCT GCGGCAGTTG CCATGTGGAC ATGTCCTCAA GCGCTTCGGC AACCGGCAGT
CATATCAAGC ATGCCCAGGC TACCGGCATT GCCTGCTCAA TCTGTCACAA CGGCGCAGGG
GCCGGCACAG CGCTCCATGC AAACGGCGTC ATTGAAAACT CATTCAGCGG CCCGTCAGCA
ACAGGAACAA TCTATTCCCA GGCGAATCTC CCGGCCGGAA ACGGATACGG CTCCTGCTCC
AACAGCTACT GCCACAGCAA TGTGCAGGGG ACAAACGGCA TCGGAGCCCC GACACAAAAC
GGTACGCCGA CCTGGGGCGG TCTCTTCCCG TGCGGCAGCT GTCATGTGAA AATGGACACC
GACGTTTCCG CCCCCGGCAG CCATGTGGCG CACGCCAACA CTACCGGCAG CGGCAATGGC
AGATTGCCCT GCTCCACATG CCATAGCGGT GCCGGTTCAG GTACGACCAA TCACGCCAAC
CAGGTCATCA ACCTGGCATT CACCGGGTCA GCCGTCAACA CCGTCTATTC CCTGGGTAAC
AACGTCGCCC CCGGCTCAGG TTACGGTTCA TGCTCGGCGA CCTACTGCCA CGGTTCCGCC
GCTCCGACCT GGGGCGGTGC ACATCTTGTC TGCAATTCCT GCCACGGCGC CAGCAATAAC
GGCGATCTCT CTGCAGGAGC CACCGGTCAT GCCATTCACT ACAACTCTGC TGCCGTGTTC
AGCAGCATAA CCGGCAGCAA CGCCCACACA TCATCAGCCT ACGCCTACGG CTGCAAGAAC
TGCCATCCGA CCAACAGCCA CGCCAACGGC CCGGCAACGG CAAACCGCGC GGCAGAGGTG
GGAGGGCTCA AAATAACTGC ATACACCGAA GCCGGCACAC CGGCCACTGA CCCTAAAGGC
ATGAAATACA CGACGGCAGG CACCTGCACC ACAGTCTGCC ACACAGACGG CAACGGCGGC
GCCCCCAAAG TGGCCGTCAA CTGGGGAACT GCGCAGGTCG GCGGCTCCAA CTGCGGAGTC
TGCCACAACA AACAGGGAGA TGCTTCACCT ACTTGGTCAG CGCCCCACAC CAAGCATGTC
AACACCTACA CCTTCACCTG CCGGAACTGC CATTTTGGAA CCGCTTCCGA CAATGCGACC
ATCAACGGCG CTTCAGGGAA AAATCAGCAT CCGAACGGGG TTAAGGATGT GGCGTTTTCC
TATAATGCTA TCCTTCGCAC CACCTGGTCC AGCACCGGCA CCCAGTGCAT CAACACTTAC
TGCCACAGCG ACGGCGCCGT CTTCGCCACC CCGACCCATG GGACTCTTTC GTGGACTACC
CCTCCGTCGA TAAACTGCGG CAGCTGTCAT GGCGGTGGTA CCGCTTCAGG TTCACCAACC
GCCGTTTCAA AAGCAAACAG CCACGCTAAA CATACCGGCA ACAACATAAA TTCCTGCTAC
CAGTGCCACA ACTCAGTAGT AAACAATGCA GGCGCCATCA TAAACCCGAC ACTGCATGTC
AATCAGGCAT ACAACATTCA GCAGAGCGGC GGTTCAGTGA CTTTCACCCT GGCACGTCAG
GGAACCGACA CCACAGCGAC TCAATGCAGC ACCGTCAGTT GCCATGGTGG CGGCGGCTCT
CCAACTACAG TAACGTGGGG CACAACTCTG AACTGCCAGG ATTGTCATGG GGATACGGCG
GATTTCGATG TATTCACCAT CCCCTTCACA AACGTTACCT CTACCCCTTT CAACACCTCA
AGTCCTGTAG CGAAGATAAA CATGACCGAA TGGACTACCA CCGGTCACGG CAAGACCAGC
GGGACTTATG CCTCCGGCAA TGGAGCGGCC GCCCTTGTCG TTGTCAATGC CTGTGAATAC
TGCCATGACC CGGCCATTAG CCACAACGCC GCGGCAAATC CTTTCCGGCT CCGGGGGAAT
ACTGGTGGGA CCGGTTGGGG GTTAAACGAT GCCTGCATGA ACTGTCATAA AACAGACGCT
GTGGGGGTTA CAGTTACAAT CGGTGGCGCA TTGAAGACCT CCGGCAAAAA AGTCGGTGCC
GTACATAACG GTACGAGCCA CAGCTTCGGT TTTAAATCCG GTGGCCTCTT CTGTTGGGAC
TGCCATGATG GCCATGGTGA CACCAACGCC TACATGATCC ACAAAAAGGT AGTGAAGAAC
TCCAGTGTCT TCGACCCATC AACAGGCTAC TTACCGACAG CCGGCGTGCC TACCGAATTT
GCAGCTCCAA AAGACCCGGT ATTTACCTTA TCTTCAAACC CGCCAATCGG CGGAGACTAC
GTCAAGGCCG ACTTTACAGG AATTTGCCAA GTCTGCCATG GCAGCGGAGT CTCTCATTAT
AACATCAACA GTTATGATAC CACTCACAAC ATAAACACAC GCTGTACCAT CTGCCATACC
CATGATGGTG ATGCCCCCAC TACCAACAAC AAAGCTTTCA GCTTTACGCG CCATTCCTAT
CCGGCATACT ACGGGCATAA AACAGATTCA GGCGCATCGC CATTCCCAAG CTGCGTGACA
ACCGGTTGCC ACAGCAATAC CAAAACAACA GGCTACCCTG TTACTTCCGG CAATCCACCC
GACTGCCAGG GATGCCATAC AAAAGCCGCT CCCGGCATCG GCTGCGGATC GTGCCATGGC
GGCGCTGATG GCAGACCGAC AGGAACTGTA TTTCCCGATA TACAAAATGG TCATTCCAGA
AGTGATCACC AGGTAACATG CGCAACATGC CATGGCACGG CGGGAAGTCC GCAAGATGCG
CATGGACCCG GAAACAGAGT TACCCATACC GATGCAGATG TAATAATCAA TTTTAGTGGG
GATGGTGCCG GAATGAATTT CACCCGGCTT GGCAACGGTT CCGGAAGCTG TACGGGAACT
TGTCATAGCA AAAACCACAG TTCCGATTCT TGGTAA
|
|---|
| Protein sequence | MNRLHIKSLV IGILCLFPSL ATAVTVDSPH DTANGYSCAS CHTLHLDLGS TGYNNVCLNC
HRPGVPKAGN KPFTPADFAN PFNTYTATRT GTLYQTSHNW NGPDEVDEAG AQPPQFAAMT
STGTGNKLRA RTGGSLACVR CHNQHDNTNK PFLRMANDRD QMCLDCHRSR NQQSHTTGTH
PVNFNYTGAT SKVKTNPAQF NNPPVNANTT NPTSDLNARL TRTGGSLVCS TCHGVHYSDS
SSATFDNNSG FNALKPSDGS LLRTDLHGAN ADDLNICTNC HAGKVAHNGR NQNIQCADCH
GGHVDFDPNA VTAQQRIPNV WLVRRYMNVS TVLRSAKNKP VYFQSTTVKN YKDASGNGVC
QSCHDVPVGS GYPDEHARLD TTTCNACHFH GNTKGSFTAI GACNTCHGYP PHGNSAGGPN
GYAVFNGTPS PFTNESSSAH ITHSGGIVYS KQCVDCHQGN THQAGTFQDV FIDTTGRIAS
SFGATPTFNG TPATAPTCSN VYCHSDGAPR NASLVPVLTT KTIPGWANGR GAIVGQPDEC
RQCHGDATTL ATNSHGKHLA DSIGCTVCHN GTVSSNNAIK DFNTHANGVK DVRFGGTLTT
GGTWTVSAAT CSGIYCHSNV QGANGNGAPT AFASPVWGSV TITCGSCHVD MSSSASATGS
HIKHAQATGI ACSICHNGAG AGTALHANGV IENSFSGPSA TGTIYSQANL PAGNGYGSCS
NSYCHSNVQG TNGIGAPTQN GTPTWGGLFP CGSCHVKMDT DVSAPGSHVA HANTTGSGNG
RLPCSTCHSG AGSGTTNHAN QVINLAFTGS AVNTVYSLGN NVAPGSGYGS CSATYCHGSA
APTWGGAHLV CNSCHGASNN GDLSAGATGH AIHYNSAAVF SSITGSNAHT SSAYAYGCKN
CHPTNSHANG PATANRAAEV GGLKITAYTE AGTPATDPKG MKYTTAGTCT TVCHTDGNGG
APKVAVNWGT AQVGGSNCGV CHNKQGDASP TWSAPHTKHV NTYTFTCRNC HFGTASDNAT
INGASGKNQH PNGVKDVAFS YNAILRTTWS STGTQCINTY CHSDGAVFAT PTHGTLSWTT
PPSINCGSCH GGGTASGSPT AVSKANSHAK HTGNNINSCY QCHNSVVNNA GAIINPTLHV
NQAYNIQQSG GSVTFTLARQ GTDTTATQCS TVSCHGGGGS PTTVTWGTTL NCQDCHGDTA
DFDVFTIPFT NVTSTPFNTS SPVAKINMTE WTTTGHGKTS GTYASGNGAA ALVVVNACEY
CHDPAISHNA AANPFRLRGN TGGTGWGLND ACMNCHKTDA VGVTVTIGGA LKTSGKKVGA
VHNGTSHSFG FKSGGLFCWD CHDGHGDTNA YMIHKKVVKN SSVFDPSTGY LPTAGVPTEF
AAPKDPVFTL SSNPPIGGDY VKADFTGICQ VCHGSGVSHY NINSYDTTHN INTRCTICHT
HDGDAPTTNN KAFSFTRHSY PAYYGHKTDS GASPFPSCVT TGCHSNTKTT GYPVTSGNPP
DCQGCHTKAA PGIGCGSCHG GADGRPTGTV FPDIQNGHSR SDHQVTCATC HGTAGSPQDA
HGPGNRVTHT DADVIINFSG DGAGMNFTRL GNGSGSCTGT CHSKNHSSDS W
|
|---|
| |