Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gura_1743 |
Symbol | |
ID | 5165510 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter uraniireducens Rf4 |
Kingdom | Bacteria |
Replicon accession | NC_009483 |
Strand | + |
Start bp | 2025431 |
End bp | 2027290 |
Gene Length | 1860 bp |
Protein Length | 619 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640549237 |
Product | alpha amylase, catalytic region |
Protein accession | YP_001230509 |
Protein GI | 148263803 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0366] Glycosidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATCGAG TGAGCGACAT CGATTTCGCG GCACTTTGCG CCGGCAGGAA GTTTCAACCG TCACCACTTG CGTGGGAAGA CCAGGTGCTT TACTTCCTGC TCCTTGACCG CTTTTCCGAT GACAAGGAAC AGGGGTACAG GGGAAACGAC GGGGAGCCGG TCACGGGCGG CCACACCCTG CCATACGACC CGGCGGTCGA CAACGGAAAC GCCGTGGCCA CCCCGGACAA TGCGGCTGTC TGGCGGGATG CGGGGGGGAA ATGGTGCCAC GGCAATCTGC GGGGCCTCAC CGGCAAGATC GGCTACCTGA AGCGGATGGG AGTGACCGCC ATCTGGCTCA GCCCGATCTT CAAGCAGGTT TCCTTCCAGC CGACCTATCA CGGCTACGGC ATCCAGGATT TTCTTTCCGT GGACCCGCAT TTCGGGAGCG TTGCAGATCT CGGGAAGATG GTGCGGACCG CCCACGCCAA TGGCATCTAC GTCATTCTCG ACATCATTCT CAACCACAGC GGCAATGTCT TTACCTATGC CGTGGAGAAC GGTGAGCCCC CCTGGCGCGG GGGAACCTAT CCGGTGGTGG GGTTCAACAA CGAGCAGGGG GCGGCAAGCC TCCCGTTTCA GGACTATGAG CAGAATCCGA TGCCAGTGGG GAAGGATGAC GCGGTCTGGC CCGGGGAATT CCAGAATCCC GCCTGCTTTA CCCAAAAGGG GCGGATCAGG AGTTGGGACT ACGACCCTGA GTTCAGGGAA GGGGACTTCT TCGACCTGAA GGACATCAAC CACGGCTACG GTCCCGACGC CGGTTACACT CCCTCCCCGG CGCTGCTCAA CCTCTGCGAG ATCTACAAGT ACTGGATCGC CGCTGCCGAC ATCGACGGCT ACCGCATCGA CACGGTTAAG CACATGGACA TCGGCGCAAC GCGCTTCTTC GTCTCGGCCA TCAAGGAGTT TGCCCAGACC ATCGGCAAGG AAAACTTCTT GCTGGTGGGG GAGATCACCG GCGGCAGGGA GCGGGCCTTC GACACCCTGG AGGAGACCGG TCTGGACGCG GCGCTGGGCA TCGACGACGT GCAGCTCAAG CTGGAAGGGC TGATGAAGGG GGAGAACAAT CCTGAGGAGT ACTTCAACCT GTTCCGCAAC TCGCTTCTGG TGCGAAAAGA CTCCCACGTC TGGTTCAAGG ACAAGGTAGT GACCATGATC AACGACCACG ATCAGGTCTG CAAGGGAGAG CACAAGGCGC GCTTCTGCGC GGCGGGCGAC GGGAGCAAGC TGGCCCTCGG AGCCCTGGCC CTGAACGCCA TGACCATCGG CATCCCCTGC ATCTACTACG GCACCGAGCA GCGCTTCGAC GGCCGGGGCG ACTGGGACGG GGCGGACCGC TACATCCGCG AGACCATGTT CGGCGGCTCC TTTGGCGCCT TCCGGTCAAA AGAGCGTCAT TTCTTCGACG AGAGCGGTGA TCTGTTCCGC GAGCTGGCTG ACATCCTGAA GCTCAGGGAA GAAAAGCTCG TGCTGCGCCG GGGACGCCAG TACCTGCGGG AGATCTCCGG CGACGGGGTC AATTTTGACC TCCCGAGAAT CATGGGGGGG CGGATGCTGT CGGTGGTGGC CTGGTCGAGG ATTCTCGACA AGACGGAGAT GGTGCTTGCC GTCAATACCG ATCCGGATAA CGCGCACAAG GCCTGGGTGC TGATGGATGC CGGGCTTCAT CCGGCGGGGA GCAGCTTGAA GTGTGTCTAT TCGACGCAGC ACGGGGATGA GGGGGCGCTG GTGCTGACGG TGCAGCGGAA GGGGGCTGCG GGCGATATTG CTGCGGTTGA GTTGGATGTG CCTGCGGCGG GATTTGTGGT GTTGGAGTAG
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Protein sequence | MDRVSDIDFA ALCAGRKFQP SPLAWEDQVL YFLLLDRFSD DKEQGYRGND GEPVTGGHTL PYDPAVDNGN AVATPDNAAV WRDAGGKWCH GNLRGLTGKI GYLKRMGVTA IWLSPIFKQV SFQPTYHGYG IQDFLSVDPH FGSVADLGKM VRTAHANGIY VILDIILNHS GNVFTYAVEN GEPPWRGGTY PVVGFNNEQG AASLPFQDYE QNPMPVGKDD AVWPGEFQNP ACFTQKGRIR SWDYDPEFRE GDFFDLKDIN HGYGPDAGYT PSPALLNLCE IYKYWIAAAD IDGYRIDTVK HMDIGATRFF VSAIKEFAQT IGKENFLLVG EITGGRERAF DTLEETGLDA ALGIDDVQLK LEGLMKGENN PEEYFNLFRN SLLVRKDSHV WFKDKVVTMI NDHDQVCKGE HKARFCAAGD GSKLALGALA LNAMTIGIPC IYYGTEQRFD GRGDWDGADR YIRETMFGGS FGAFRSKERH FFDESGDLFR ELADILKLRE EKLVLRRGRQ YLREISGDGV NFDLPRIMGG RMLSVVAWSR ILDKTEMVLA VNTDPDNAHK AWVLMDAGLH PAGSSLKCVY STQHGDEGAL VLTVQRKGAA GDIAAVELDV PAAGFVVLE
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