Gene Gura_1743 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGura_1743 
Symbol 
ID5165510 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter uraniireducens Rf4 
KingdomBacteria 
Replicon accessionNC_009483 
Strand
Start bp2025431 
End bp2027290 
Gene Length1860 bp 
Protein Length619 aa 
Translation table11 
GC content62% 
IMG OID640549237 
Productalpha amylase, catalytic region 
Protein accessionYP_001230509 
Protein GI148263803 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0366] Glycosidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCGAG TGAGCGACAT CGATTTCGCG GCACTTTGCG CCGGCAGGAA GTTTCAACCG 
TCACCACTTG CGTGGGAAGA CCAGGTGCTT TACTTCCTGC TCCTTGACCG CTTTTCCGAT
GACAAGGAAC AGGGGTACAG GGGAAACGAC GGGGAGCCGG TCACGGGCGG CCACACCCTG
CCATACGACC CGGCGGTCGA CAACGGAAAC GCCGTGGCCA CCCCGGACAA TGCGGCTGTC
TGGCGGGATG CGGGGGGGAA ATGGTGCCAC GGCAATCTGC GGGGCCTCAC CGGCAAGATC
GGCTACCTGA AGCGGATGGG AGTGACCGCC ATCTGGCTCA GCCCGATCTT CAAGCAGGTT
TCCTTCCAGC CGACCTATCA CGGCTACGGC ATCCAGGATT TTCTTTCCGT GGACCCGCAT
TTCGGGAGCG TTGCAGATCT CGGGAAGATG GTGCGGACCG CCCACGCCAA TGGCATCTAC
GTCATTCTCG ACATCATTCT CAACCACAGC GGCAATGTCT TTACCTATGC CGTGGAGAAC
GGTGAGCCCC CCTGGCGCGG GGGAACCTAT CCGGTGGTGG GGTTCAACAA CGAGCAGGGG
GCGGCAAGCC TCCCGTTTCA GGACTATGAG CAGAATCCGA TGCCAGTGGG GAAGGATGAC
GCGGTCTGGC CCGGGGAATT CCAGAATCCC GCCTGCTTTA CCCAAAAGGG GCGGATCAGG
AGTTGGGACT ACGACCCTGA GTTCAGGGAA GGGGACTTCT TCGACCTGAA GGACATCAAC
CACGGCTACG GTCCCGACGC CGGTTACACT CCCTCCCCGG CGCTGCTCAA CCTCTGCGAG
ATCTACAAGT ACTGGATCGC CGCTGCCGAC ATCGACGGCT ACCGCATCGA CACGGTTAAG
CACATGGACA TCGGCGCAAC GCGCTTCTTC GTCTCGGCCA TCAAGGAGTT TGCCCAGACC
ATCGGCAAGG AAAACTTCTT GCTGGTGGGG GAGATCACCG GCGGCAGGGA GCGGGCCTTC
GACACCCTGG AGGAGACCGG TCTGGACGCG GCGCTGGGCA TCGACGACGT GCAGCTCAAG
CTGGAAGGGC TGATGAAGGG GGAGAACAAT CCTGAGGAGT ACTTCAACCT GTTCCGCAAC
TCGCTTCTGG TGCGAAAAGA CTCCCACGTC TGGTTCAAGG ACAAGGTAGT GACCATGATC
AACGACCACG ATCAGGTCTG CAAGGGAGAG CACAAGGCGC GCTTCTGCGC GGCGGGCGAC
GGGAGCAAGC TGGCCCTCGG AGCCCTGGCC CTGAACGCCA TGACCATCGG CATCCCCTGC
ATCTACTACG GCACCGAGCA GCGCTTCGAC GGCCGGGGCG ACTGGGACGG GGCGGACCGC
TACATCCGCG AGACCATGTT CGGCGGCTCC TTTGGCGCCT TCCGGTCAAA AGAGCGTCAT
TTCTTCGACG AGAGCGGTGA TCTGTTCCGC GAGCTGGCTG ACATCCTGAA GCTCAGGGAA
GAAAAGCTCG TGCTGCGCCG GGGACGCCAG TACCTGCGGG AGATCTCCGG CGACGGGGTC
AATTTTGACC TCCCGAGAAT CATGGGGGGG CGGATGCTGT CGGTGGTGGC CTGGTCGAGG
ATTCTCGACA AGACGGAGAT GGTGCTTGCC GTCAATACCG ATCCGGATAA CGCGCACAAG
GCCTGGGTGC TGATGGATGC CGGGCTTCAT CCGGCGGGGA GCAGCTTGAA GTGTGTCTAT
TCGACGCAGC ACGGGGATGA GGGGGCGCTG GTGCTGACGG TGCAGCGGAA GGGGGCTGCG
GGCGATATTG CTGCGGTTGA GTTGGATGTG CCTGCGGCGG GATTTGTGGT GTTGGAGTAG
 
Protein sequence
MDRVSDIDFA ALCAGRKFQP SPLAWEDQVL YFLLLDRFSD DKEQGYRGND GEPVTGGHTL 
PYDPAVDNGN AVATPDNAAV WRDAGGKWCH GNLRGLTGKI GYLKRMGVTA IWLSPIFKQV
SFQPTYHGYG IQDFLSVDPH FGSVADLGKM VRTAHANGIY VILDIILNHS GNVFTYAVEN
GEPPWRGGTY PVVGFNNEQG AASLPFQDYE QNPMPVGKDD AVWPGEFQNP ACFTQKGRIR
SWDYDPEFRE GDFFDLKDIN HGYGPDAGYT PSPALLNLCE IYKYWIAAAD IDGYRIDTVK
HMDIGATRFF VSAIKEFAQT IGKENFLLVG EITGGRERAF DTLEETGLDA ALGIDDVQLK
LEGLMKGENN PEEYFNLFRN SLLVRKDSHV WFKDKVVTMI NDHDQVCKGE HKARFCAAGD
GSKLALGALA LNAMTIGIPC IYYGTEQRFD GRGDWDGADR YIRETMFGGS FGAFRSKERH
FFDESGDLFR ELADILKLRE EKLVLRRGRQ YLREISGDGV NFDLPRIMGG RMLSVVAWSR
ILDKTEMVLA VNTDPDNAHK AWVLMDAGLH PAGSSLKCVY STQHGDEGAL VLTVQRKGAA
GDIAAVELDV PAAGFVVLE