Gene Gura_1729 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGura_1729 
Symbol 
ID5162818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter uraniireducens Rf4 
KingdomBacteria 
Replicon accessionNC_009483 
Strand
Start bp2007829 
End bp2010723 
Gene Length2895 bp 
Protein Length964 aa 
Translation table11 
GC content52% 
IMG OID640549224 
Productsignal transduction histidine kinase 
Protein accessionYP_001230496 
Protein GI148263790 
COG category[T] Signal transduction mechanisms 
COG ID[COG3920] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0370864 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAATCC GTATCCGTCT CAAAACCGCA CTCATTGTCA ATTATATTCT TGTCGCCGTA 
ATCCCTCTGC TGATTATCGG CCTGATTTCC CTTCATTTCG AACGGCGGGA CCTGCTGCGT
GTTATTTCCG GCAAGAATAT GCTGCTTGCC GAAACAGTGG CGGAGGAGGT CGATACATTT
CTCCAGGAGC CGTTGAACAT GCTTCGCCAG GTGGGAGAGG TGACACATCG TGAGCGGTAC
TTGAAGGGGG CAGACTTCAA CGTATTTATT GATTCGATCG TAGCAACATA CAGTTTTTTT
GAATCTATCT ATATTCTTGA TGACAAGGGC CGTGCCGATC ATGTCGGCCT GCTGCCCGGG
ATCAAGGGCC GCAAGGCGGA ATATCTGGGG AAAGATATGG CGGGTGAGGA GTTTTACAAG
ACCGCCCGGC AGAAGAAAGG CCACTGGTGG ACGAGTACCT CCTTGTCCCG GATCAGCGGG
GAGCCGTCTC TTACCCTTGC CGTTCCCGTC ATTAACGGAA TGGTGGTCGG CAACCTGAAC
CTCCGGGCGC TCGATAAGAT TATCGCGCCG ATAAACAGGA GGAAGGGTAT TTATGCATAC
ATCGTCAACA GGGACGGGAG GGTAATCGCC CATCCGGACA GGACAAACGT GCTGCAGCAA
TTGAACGTTG CCGATCTGAA CATCGTTAAG GCCGGACTTG CCGGCACCAA TGGAACATAT
CGTTATTTTT TCAAGGGGGT GGAACGGCAG GGGAGCGTTG CGGTCGTTCG TGAAAGCGGC
TGGCTGGTGG TTATCGCCCA GAACCTGGAT GACACTCTGG CGCCGGTGAG AAGGATGGAG
AAAATATTTC TGGCCGGACT CCTCGGATCG CTTCTCGTGG CATTATTCAA CACGATCTGG
AGTCTGGAGT TGTTGCTGAA ACCGGTTTCG GCCCTGATAA ACAGTACCCA GAAGATCGCT
GTTGGAAATT ATGCCATAGA TAATGAGCCG ATCAATATCA AGGAGGTCGG TGAGCTGGCG
GTTCATCTGC AATCCATGGC CGGGGCGGTC ATGAGCCGCG AAGAGGCCCT GCGTGAGCAG
AATGAAGAAC TCTCCATGAC CGAAGAGGAG CTGCGTCAGC AGGTGGATGA ATATCTGAAG
AGCCAGGATG AACTTCTCGA GACCAATCAT GCTCTGGAGG CGTTATTTAA GGCCGCACCG
CTGGCTATCA TCGCCTTTGA TGCAACCGGT AAGGTGAAAA TGTGGAATCC CGCCGCCGAA
AGGATCTTTG GTTGGGGACG AGACGAAGTT GTCGGCAATC TCTATCCGCT CATTCCTGAT
GGGAAAATGG ACGAATTTCA GGCGTATCTC GACAGGGCGC TCGCCGGAGA GACCCTTGCG
GGCATCGAGC TGCGTCGCCA GAAGAAGAGT GGCTTGCCTA TAGATATCTC TCTCGATGCA
GCGCCATTGC ATAACGCCAA GGGGGAAATT GCCGGCGTTA TAGCGCTTCT GGCCGATATC
GGCGAGCGAA AACAGGCAGA GAAGGCTCTT TGGGAAAGCG ATAAACGATT TACCCTGTTC
ATGGACAATC TCCCAGCAAG GGCATACATG AAGGATGTCA ACGGCCATTA CATCTATGTT
AATGAGACAT TACGCCGCTA CTTCGCCGAG CGAAAGATCG CCTGGTTTGG CAGGAGGGAC
GACGACATCT GGCCGGCCTC CACCGCAGCC CTGTTCAAGG AAAACGACCT TTTCGTGCTT
GAGCAGAAGA GGGCTGTCCA GGTGATAGAG CCGGTTGTCG AGGATGACAG GCTGTCCTAC
TGGCTTAACA GCAAATTTCC GATTTTCAAC GAGAACGGCG ATTCCATCAT CACCGCCGGT
GTTACCGTCG ACATAACGGA ACGCAAGCAG GCGGAAGATG CGCTACAGGC GGAACGGGCG
CGGCTGTTTT CCTTGTTACA GGGGCTCCCC GCCTATGTCT ACCTCAAGGC GCAGGATCAT
ACCGTCCGTT TTGCCAATAG CTATTTCCGC CAGAACTTTG GTGATCCGGA AGGTAAAAAA
TGCTACGATA TCTTCCACGG AAATCACGGC CTTTGTTGCG AATGCCGGAC GTTGCACTCG
CTGGAAACGC AGACCACATG TAAATGGGAA TGGACCGCCG GCACAGGCAG GACATACGAA
GTCTATGATT ATCCTTTTAC CGACAGTGAC GGTTCCCCTC TAACGCTGGA GCTGGGGATC
GACATCACGG AGCGGATCGC GGCAGAGGAG CAGACAAAGG CGTCTCTCAA GGAAAAAGAG
GTGTTGCTGA AGGAAATCCA CCATCGCGTC AAAAATAATC TCCAGGTCAT CTCCAGCTTG
CTCAATCTTC AATCCCGCCA TATCCACGAT CAGCGGGATG TGGATATGTT CATGGACAGT
CAGAACCGCG TTAAATCCAT GGCCCTTATC CATGAAAACC TCTATCAGAC CAAGAACCTG
GCGCGCATTG ATTTTGCAGG ATACATCCGC AAACTTTCCG CGAATCTGTT CAGATCCTAC
GGAATCAACA TCAATGCCGT TAATCTTAAT CTCAACATAG CCGATGTCTC TCTTGGCATA
GATACGGCTG TTCCATGCGG CCTGATGATC AACGAGCTGG TTTCCAACTC ATTGAAACAC
GGATTCCCAC AGGGTAGAAA AGGGTCAATC GACATCGAAT TGCTGACGGA TTACGCCGGC
AACCATACCC TGATCGTCAG GGATAATGGT GTCGGATTTC CGGCGGACCT GGATTTTCAA
TCAACTGAAT CACTTGGTCT GCAACTGGTA GGAACCTTGA CCGAACAGAT TGGCGGTAGT
ATTGTCCTTG ACAGGGAAAA CGGCACGGAA TTCAGGATAA ATTTCAAAGA ATTGAAATAC
AAGGAGCGGG TATAA
 
Protein sequence
MKIRIRLKTA LIVNYILVAV IPLLIIGLIS LHFERRDLLR VISGKNMLLA ETVAEEVDTF 
LQEPLNMLRQ VGEVTHRERY LKGADFNVFI DSIVATYSFF ESIYILDDKG RADHVGLLPG
IKGRKAEYLG KDMAGEEFYK TARQKKGHWW TSTSLSRISG EPSLTLAVPV INGMVVGNLN
LRALDKIIAP INRRKGIYAY IVNRDGRVIA HPDRTNVLQQ LNVADLNIVK AGLAGTNGTY
RYFFKGVERQ GSVAVVRESG WLVVIAQNLD DTLAPVRRME KIFLAGLLGS LLVALFNTIW
SLELLLKPVS ALINSTQKIA VGNYAIDNEP INIKEVGELA VHLQSMAGAV MSREEALREQ
NEELSMTEEE LRQQVDEYLK SQDELLETNH ALEALFKAAP LAIIAFDATG KVKMWNPAAE
RIFGWGRDEV VGNLYPLIPD GKMDEFQAYL DRALAGETLA GIELRRQKKS GLPIDISLDA
APLHNAKGEI AGVIALLADI GERKQAEKAL WESDKRFTLF MDNLPARAYM KDVNGHYIYV
NETLRRYFAE RKIAWFGRRD DDIWPASTAA LFKENDLFVL EQKRAVQVIE PVVEDDRLSY
WLNSKFPIFN ENGDSIITAG VTVDITERKQ AEDALQAERA RLFSLLQGLP AYVYLKAQDH
TVRFANSYFR QNFGDPEGKK CYDIFHGNHG LCCECRTLHS LETQTTCKWE WTAGTGRTYE
VYDYPFTDSD GSPLTLELGI DITERIAAEE QTKASLKEKE VLLKEIHHRV KNNLQVISSL
LNLQSRHIHD QRDVDMFMDS QNRVKSMALI HENLYQTKNL ARIDFAGYIR KLSANLFRSY
GININAVNLN LNIADVSLGI DTAVPCGLMI NELVSNSLKH GFPQGRKGSI DIELLTDYAG
NHTLIVRDNG VGFPADLDFQ STESLGLQLV GTLTEQIGGS IVLDRENGTE FRINFKELKY
KERV