| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_1605 |
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| Symbol | |
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| ID | 5164857 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter uraniireducens Rf4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009483 |
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| Strand | + |
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| Start bp | 1867800 |
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| End bp | 1868387 |
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| Gene Length | 588 bp |
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| Protein Length | 195 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640549102 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_001230374 |
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| Protein GI | 148263668 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000000269672 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTTTGCC CGAGGACAGA TTTCAGAGGA AGTCACGTGC AGATTATTCT TTTCAATAAA
CCCTTTAACA TCCTTTGCCA GTTTACAGAA CCGGGCAAAC GCCTGACCTT GGCAGACTAT
ATTTCTATCC CCGGCGTTTA TGCCGCCGGT CGGCTGGATT ATGATAGCGA AGGTTTGCTC
GTCCTCACCG ACACGGGACG TATTCAGCAG CGAATCGCCG ATCCACGCGC TGATATGGCT
AAATCCTATT GGGTCCAGGT GGAAGGTGTT CCTACCTTGG CCGCCATTCA ACAGTTGACC
TGCGGTGTTC TGCTTGAAGA TGGATTGACC TTGCCGGCCA TTGTCGAGCA GATTAAACCA
CCGTCGGTTT GGCTACGCAC CCCCCAGATT CGCGAACGGC GACAGATTCC AACCACCTGG
CTGGCGATAA CCCTGACTGA AGACCGAAAT CGTCTGATTC GGCGGATGAC CGCTGCCGTC
GGCCTGCCGA CTTTACGGCT GATTCGGCAG GCCGTTGGAC CATGGCAACT CAATAAGTTA
CAACCCGGCG ACTGGAAAGT CGCCAGCATC CCGGCTGAAT GGCTGTAG
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| Protein sequence | MFCPRTDFRG SHVQIILFNK PFNILCQFTE PGKRLTLADY ISIPGVYAAG RLDYDSEGLL
VLTDTGRIQQ RIADPRADMA KSYWVQVEGV PTLAAIQQLT CGVLLEDGLT LPAIVEQIKP
PSVWLRTPQI RERRQIPTTW LAITLTEDRN RLIRRMTAAV GLPTLRLIRQ AVGPWQLNKL
QPGDWKVASI PAEWL
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