| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_1467 |
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| Symbol | rpsA |
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| ID | 5163016 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter uraniireducens Rf4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009483 |
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| Strand | + |
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| Start bp | 1699043 |
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| End bp | 1700797 |
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| Gene Length | 1755 bp |
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| Protein Length | 584 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640548966 |
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| Product | 30S ribosomal protein S1 |
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| Protein accession | YP_001230239 |
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| Protein GI | 148263533 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000364254 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGAGACG ACAAGAAAAC ATTCAAGAAA AAAGACATGC CGATCAGGCG ATTGCATGAT
ACGGATGAGG AGATGGAGCA GGAGGAGCGG GGAGAGTTTG CCGAGCTTTA TCAGGACAGC
CTGCGTCAGC CCCAGTCCGG CGAAATTGTA AAAGGTGTGG TAGTGCAGAT CGAAGCGGAT
TGCGTTCTGG TGGATGTGGG ATACAAGTCG GAAGGGTGTA TCCGCATCAA CGAATTTATA
GATGAAACTG GCGAACTTAC GGTCAAGATC GGCGATGAAG TCAATGTATT CTTTGAGCGC
GGCGAAAACA TCCGCGGGCA CATGGTTCTT TCCAAGAAAA AGGCCGACTC GCAGGTGGCG
TGGGAAGCCA TAGCCGCAGC CGGTGGTGAA GGCGGAGTCA TCGAAGGAAA GATAACCGGC
AAGGTGAAAG GTGGATTGAT CGTCGATGTC GGTATCGAAG CCTTCCTTCC CGCTTCACAG
GTGGACATCA GACCTGGCGG CAACCTGGAC AGATTCATCG GTGAAACCTG CAAGTTCAAA
GTCCTGAAAA TGAACAGGAA ACGGGGCAAC ATCGTCCTCT CCCGCAGGGT GCTTCTCGAA
GAAGAGCGTG ACAAGGCAAG GACTACTACG CTGGCCACCC TGTCCGAAGG GGATGTGGTC
GATGGGATTG TCAAGAACAT CGCCGACTAC GGCGCATTCG TAGATCTTGG CGGGGTCGAT
GGACTTCTTC ATGTCACTGA CATGTCCTGG GGGAGGTTGA ATCATCCGTC CGAGGCGGTA
AAGGTCGGTG ACACAATCAA GGTTAAAGTG CTCAAGTACG ACCGCGAGAA AGGGAAAATA
TCCCTTGGTC TCAAGCAGAC CATGGCAGAT CCATGGCTGA ACGTTGAAAC AAAATATCAG
ATCGGCGAAA GGGTGCAGGG CAGGGTTGTG AGCCTCACCG ATTACGGCGC ATTCATCGCA
CTTGAAGAGG GTGTCGAGGG TCTTGTACAC ATTTCCGAAA TGTCCTGGAC CAAGAGGGTG
CGTCATCCTT CCGAACTGCT CACTGTCGGT GACAATGTTG AAGCCTTGAT CCTCGGCGTA
GACACCTCCA ACCGTCGTAT TTCGCTCGGG CTGAAGCAGA CCGAGGTGAA TCCCTGGACA
GTCATTGGTG AAAGGTATCC GGTCGGGACA AAGATAGAAG GTCAGATCAA AAACATAACC
GATTTTGGTG TGTTCATCGG TATTGAGGAT GGTATAGACG GTCTCGTACA CGTTTCCGAC
ATATCCTGGA CCAAGCGGAT CAAGCATCCC GGTGAACTCT ACAGCAAAGG CCAGACAGTA
CAGGCCGTGG TCCTCAATAT TGACGCTGAT AACGAGAGGC TTTCCCTCGG CATCAAACAA
CTTACTCCCG ACCCGTGGGA TGAAATCCCG AGCAAATTCA AACCCGGTAC GCGCATTAAG
GGGAAGGTGA CATCCATTAC GGATTTCGGC GTGTTCATGG AGATTGAAGA AGGTATCGAG
GGACTTGTTC ATATTTCCGA GCTTTCCCAG GAAAAACTGG CCTCAACCAA GGACTTCGCT
GCGGTTGGCG ATGAACTCGA TGCCGTGGTG CTCAACGTGG ATACGGTCGA GAAAAAAATA
GCCCTATCCA TCAAGTCCTT ACAGACTGCC ATTGATAAAG CCGAGCTGGC CTCTTACATG
GGATCACAGG GCGAAGCCAC ATCAAACCTT GGGGCACTGC TGAAAGAGGG ATTAAAGAAA
AACGGGGATG AGTAG
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| Protein sequence | MGDDKKTFKK KDMPIRRLHD TDEEMEQEER GEFAELYQDS LRQPQSGEIV KGVVVQIEAD
CVLVDVGYKS EGCIRINEFI DETGELTVKI GDEVNVFFER GENIRGHMVL SKKKADSQVA
WEAIAAAGGE GGVIEGKITG KVKGGLIVDV GIEAFLPASQ VDIRPGGNLD RFIGETCKFK
VLKMNRKRGN IVLSRRVLLE EERDKARTTT LATLSEGDVV DGIVKNIADY GAFVDLGGVD
GLLHVTDMSW GRLNHPSEAV KVGDTIKVKV LKYDREKGKI SLGLKQTMAD PWLNVETKYQ
IGERVQGRVV SLTDYGAFIA LEEGVEGLVH ISEMSWTKRV RHPSELLTVG DNVEALILGV
DTSNRRISLG LKQTEVNPWT VIGERYPVGT KIEGQIKNIT DFGVFIGIED GIDGLVHVSD
ISWTKRIKHP GELYSKGQTV QAVVLNIDAD NERLSLGIKQ LTPDPWDEIP SKFKPGTRIK
GKVTSITDFG VFMEIEEGIE GLVHISELSQ EKLASTKDFA AVGDELDAVV LNVDTVEKKI
ALSIKSLQTA IDKAELASYM GSQGEATSNL GALLKEGLKK NGDE
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