Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gura_1467 |
Symbol | rpsA |
ID | 5163016 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter uraniireducens Rf4 |
Kingdom | Bacteria |
Replicon accession | NC_009483 |
Strand | + |
Start bp | 1699043 |
End bp | 1700797 |
Gene Length | 1755 bp |
Protein Length | 584 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640548966 |
Product | 30S ribosomal protein S1 |
Protein accession | YP_001230239 |
Protein GI | 148263533 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0539] Ribosomal protein S1 |
TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000364254 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGAGACG ACAAGAAAAC ATTCAAGAAA AAAGACATGC CGATCAGGCG ATTGCATGAT ACGGATGAGG AGATGGAGCA GGAGGAGCGG GGAGAGTTTG CCGAGCTTTA TCAGGACAGC CTGCGTCAGC CCCAGTCCGG CGAAATTGTA AAAGGTGTGG TAGTGCAGAT CGAAGCGGAT TGCGTTCTGG TGGATGTGGG ATACAAGTCG GAAGGGTGTA TCCGCATCAA CGAATTTATA GATGAAACTG GCGAACTTAC GGTCAAGATC GGCGATGAAG TCAATGTATT CTTTGAGCGC GGCGAAAACA TCCGCGGGCA CATGGTTCTT TCCAAGAAAA AGGCCGACTC GCAGGTGGCG TGGGAAGCCA TAGCCGCAGC CGGTGGTGAA GGCGGAGTCA TCGAAGGAAA GATAACCGGC AAGGTGAAAG GTGGATTGAT CGTCGATGTC GGTATCGAAG CCTTCCTTCC CGCTTCACAG GTGGACATCA GACCTGGCGG CAACCTGGAC AGATTCATCG GTGAAACCTG CAAGTTCAAA GTCCTGAAAA TGAACAGGAA ACGGGGCAAC ATCGTCCTCT CCCGCAGGGT GCTTCTCGAA GAAGAGCGTG ACAAGGCAAG GACTACTACG CTGGCCACCC TGTCCGAAGG GGATGTGGTC GATGGGATTG TCAAGAACAT CGCCGACTAC GGCGCATTCG TAGATCTTGG CGGGGTCGAT GGACTTCTTC ATGTCACTGA CATGTCCTGG GGGAGGTTGA ATCATCCGTC CGAGGCGGTA AAGGTCGGTG ACACAATCAA GGTTAAAGTG CTCAAGTACG ACCGCGAGAA AGGGAAAATA TCCCTTGGTC TCAAGCAGAC CATGGCAGAT CCATGGCTGA ACGTTGAAAC AAAATATCAG ATCGGCGAAA GGGTGCAGGG CAGGGTTGTG AGCCTCACCG ATTACGGCGC ATTCATCGCA CTTGAAGAGG GTGTCGAGGG TCTTGTACAC ATTTCCGAAA TGTCCTGGAC CAAGAGGGTG CGTCATCCTT CCGAACTGCT CACTGTCGGT GACAATGTTG AAGCCTTGAT CCTCGGCGTA GACACCTCCA ACCGTCGTAT TTCGCTCGGG CTGAAGCAGA CCGAGGTGAA TCCCTGGACA GTCATTGGTG AAAGGTATCC GGTCGGGACA AAGATAGAAG GTCAGATCAA AAACATAACC GATTTTGGTG TGTTCATCGG TATTGAGGAT GGTATAGACG GTCTCGTACA CGTTTCCGAC ATATCCTGGA CCAAGCGGAT CAAGCATCCC GGTGAACTCT ACAGCAAAGG CCAGACAGTA CAGGCCGTGG TCCTCAATAT TGACGCTGAT AACGAGAGGC TTTCCCTCGG CATCAAACAA CTTACTCCCG ACCCGTGGGA TGAAATCCCG AGCAAATTCA AACCCGGTAC GCGCATTAAG GGGAAGGTGA CATCCATTAC GGATTTCGGC GTGTTCATGG AGATTGAAGA AGGTATCGAG GGACTTGTTC ATATTTCCGA GCTTTCCCAG GAAAAACTGG CCTCAACCAA GGACTTCGCT GCGGTTGGCG ATGAACTCGA TGCCGTGGTG CTCAACGTGG ATACGGTCGA GAAAAAAATA GCCCTATCCA TCAAGTCCTT ACAGACTGCC ATTGATAAAG CCGAGCTGGC CTCTTACATG GGATCACAGG GCGAAGCCAC ATCAAACCTT GGGGCACTGC TGAAAGAGGG ATTAAAGAAA AACGGGGATG AGTAG
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Protein sequence | MGDDKKTFKK KDMPIRRLHD TDEEMEQEER GEFAELYQDS LRQPQSGEIV KGVVVQIEAD CVLVDVGYKS EGCIRINEFI DETGELTVKI GDEVNVFFER GENIRGHMVL SKKKADSQVA WEAIAAAGGE GGVIEGKITG KVKGGLIVDV GIEAFLPASQ VDIRPGGNLD RFIGETCKFK VLKMNRKRGN IVLSRRVLLE EERDKARTTT LATLSEGDVV DGIVKNIADY GAFVDLGGVD GLLHVTDMSW GRLNHPSEAV KVGDTIKVKV LKYDREKGKI SLGLKQTMAD PWLNVETKYQ IGERVQGRVV SLTDYGAFIA LEEGVEGLVH ISEMSWTKRV RHPSELLTVG DNVEALILGV DTSNRRISLG LKQTEVNPWT VIGERYPVGT KIEGQIKNIT DFGVFIGIED GIDGLVHVSD ISWTKRIKHP GELYSKGQTV QAVVLNIDAD NERLSLGIKQ LTPDPWDEIP SKFKPGTRIK GKVTSITDFG VFMEIEEGIE GLVHISELSQ EKLASTKDFA AVGDELDAVV LNVDTVEKKI ALSIKSLQTA IDKAELASYM GSQGEATSNL GALLKEGLKK NGDE
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