| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_1346 |
|---|
| Symbol | |
|---|
| ID | 5163648 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter uraniireducens Rf4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009483 |
|---|
| Strand | + |
|---|
| Start bp | 1588840 |
|---|
| End bp | 1590759 |
|---|
| Gene Length | 1920 bp |
|---|
| Protein Length | 639 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640548847 |
|---|
| Product | asparagine synthase |
|---|
| Protein accession | YP_001230120 |
|---|
| Protein GI | 148263414 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0367] Asparagine synthase (glutamine-hydrolyzing) |
|---|
| TIGRFAM ID | [TIGR01536] asparagine synthase (glutamine-hydrolyzing) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTGTA TCTTCGGTTT TTTACGGCGT GATGGTGCTT CAATCGCACC GCTTACCATG
GAGACCATGC GGCGTCACAT GGCTGAATGG GGGCCGGACG GCGGTGACGT GTTGCTGGAC
GGTCCTGCGG CGATGGGACA GATGCGTCTG TTCAGCACGC CTGAGGCGAC GTATGAGAAG
ATGCCGCTCA TTGATGCGGC AGAGGGCTTC ATCTTTACCG CGGCCGGACG CGTGGACAAC
CGGCAAGAGT TGATCGCGGA TTGCGGATTG CGGATTGCCG AATATGAAAA ATGCGGAATC
CCGGATGGTG AAGTGATCCT TCAGGCCTAT CGCAAATGGG GCGAGGATTG CCCGAAGCGC
ATTTACGGAG ACTGGTCTTT CGCCGTATGG CATCCCCGTG AACGCAGGCT TTTTCTCGCC
CGCGACCACT ATGGCAACAC ATCGCTTTAT TATTATGCAG ACCGGCATGT GTTTGCCTTT
GCTTCTGACC GCAAAGCATT GCTCGCACTG GACCTTGTGC CCAAAGAGAT GGACGAACTC
TACCTTGCAC AGGTGCTGGT TTCGTGGCCT GCTTATCACG GAGAGCGCAC CATCCACACG
CCTGTTAAGC GCCTGCCGCC TGCGCATTGC CTGACAGTTT CGCATGAACG CCTCGATGTG
CGCCGGTATT GGCGATTGGA AGAGACTCCC GAACTGCGCC TGCCACGGCG TAATGATTAT
GTAGAGGCAT TTCGCGATCT GTTCGATGAG GCGGTACGCT GCAGACTGAG GGTTGCAAAC
GGCGGCAACA CACAAGGAAA TGGGGCCGGG CAAATTGCCG TAACACTCAG CGGGGGGCTG
GATTCCGGGT CGGTTACTGC CACGGCGGCG CATTTCCTGC GTAACGAAGG TAGACGCCTG
ACAGCTTTTA CTTCTGTGCC GCTTTCGGAT ACAAGCGCCT ATGTAAAAAA GAACTTTGGC
GATGAGTTTC CCTTTGCCCG GTCTACCGCG CAATTCGCCG GGAATGTAGA TCATCTGCCC
ATCACCGCGG CAGCAATTAC GCCCATACAG GCAATTCGTC GGATGCTTCG GATTCACGGC
GAGCCGGCGC ACGCCGCTGG AAATTTTTTC TGGATGCTGG AGCTGGAAGA GACTGCACGT
GCCTGTGGCT GCCGTGCCCT GCTCACCGGT CAGGTGGGTA ACGGTGGCAT CTCATGGACA
GGTGATGTGT TCTCACAGCC GCTCGCATTG CAGTTACGCC ATTATGGCTG GAGGAAATGG
ACAAAGGAAA GCGCAAAGCG GATTGCATCC CCTGTCTTGC TGAAGGCATA CCGCCGCGCG
CGAATGCCGA AGGATTATTC ATGGTGCCAA TCATCCGCCA TCCATCCTGA TTTTGCTCGC
CGCTTGAACC TGCTGGAACA ACGATTGAAC GACCCTGCCG AGCATCCGCG CAGTCCGCAA
GAAAAGCGTT TTCAGATTCT CCAGCCCGGC TGCTCCTTTG TCGGTGCGCT GCATGCCCAA
ATGGGGGCAG CTCACGGGCT GGAAATACGC GACCCTACTG CAGATGCACG TGTCCTCGCC
TTCACGCTCT CGGTGCCCGA CTACATCTTC ATGGACCCGA CGACGGGGCT GGATCGTTGG
CTCATCCGCG AGGCCATGAA GGGCCGTCTG CCGGACGAGG TGCGTTTAAA TCGCGAGAGG
GGTCGTCAGG CGGGCGACCT TGTCCCTCGG CTTCGCGCCT GCGCCGACGA GGTAGAAACC
GCCCTGGACG AGTTGGCCGT GGGGCCTGCG GCCGCCTATC TAAATGTGCC TTATATGCGC
GAGGTGTGGG CAATGGTCCG CACCGATGAC ACTCCGGAAG CTTTTCGCAA GTCGGTAACC
ATTCTCACCA GAGGCATCAT GGCCGGATTG TGGGTGAATG GGTTCTACAA TGTAACCTGA
|
|---|
| Protein sequence | MSCIFGFLRR DGASIAPLTM ETMRRHMAEW GPDGGDVLLD GPAAMGQMRL FSTPEATYEK
MPLIDAAEGF IFTAAGRVDN RQELIADCGL RIAEYEKCGI PDGEVILQAY RKWGEDCPKR
IYGDWSFAVW HPRERRLFLA RDHYGNTSLY YYADRHVFAF ASDRKALLAL DLVPKEMDEL
YLAQVLVSWP AYHGERTIHT PVKRLPPAHC LTVSHERLDV RRYWRLEETP ELRLPRRNDY
VEAFRDLFDE AVRCRLRVAN GGNTQGNGAG QIAVTLSGGL DSGSVTATAA HFLRNEGRRL
TAFTSVPLSD TSAYVKKNFG DEFPFARSTA QFAGNVDHLP ITAAAITPIQ AIRRMLRIHG
EPAHAAGNFF WMLELEETAR ACGCRALLTG QVGNGGISWT GDVFSQPLAL QLRHYGWRKW
TKESAKRIAS PVLLKAYRRA RMPKDYSWCQ SSAIHPDFAR RLNLLEQRLN DPAEHPRSPQ
EKRFQILQPG CSFVGALHAQ MGAAHGLEIR DPTADARVLA FTLSVPDYIF MDPTTGLDRW
LIREAMKGRL PDEVRLNRER GRQAGDLVPR LRACADEVET ALDELAVGPA AAYLNVPYMR
EVWAMVRTDD TPEAFRKSVT ILTRGIMAGL WVNGFYNVT
|
|---|
| |