Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gura_1240 |
Symbol | |
ID | 5165147 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter uraniireducens Rf4 |
Kingdom | Bacteria |
Replicon accession | NC_009483 |
Strand | - |
Start bp | 1466680 |
End bp | 1470666 |
Gene Length | 3987 bp |
Protein Length | 1328 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640548744 |
Product | YD repeat-containing protein |
Protein accession | YP_001230017 |
Protein GI | 148263311 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01643] YD repeat (two copies) |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTCCCA TCCGTTGTGC TGGCAATTCC CTGCAAAACG CCGTTCTCGT TCTATGCCTG ACGCTTTCCA TCTTCTTCAC CGTAAATGCC CATGCGGCAG ACGAGAAAGT TGTCGGCAAG GAAGTCGCTG ACGGAACCGA CACCTCGGCA AACAGCGACA CGCCTTTACC AGACCTCTTC ACAGGGACCA TGAGCTATCG CATTCCTATT GAAGTCCCGC CCGGCCGTAG AGGTGTAGAT CCCGGCATAG TCCTCACCTA TCGGAGCACG AACGGCAACG GTTGGCTGGG TGTCGGCTGG GAACTGGAAA TGGGTTCAAT AGAGCGGAGC ACCAAAGGAG GCGTGAACTA TGACGCCAGC GACTTTCTAT TGCGCGGACC GGGCGGGGTA ACGGAATTGG TCAATCTCCC CGGCACCTCC GAATACCGCG CCAAGATAGA AGGGAACTTC ATTCGGTTTA TAAATTATGG AACCTATTGG GAAGCGATTG ATAAAAAGGG GGTACGCTTC CGTTTCGGTC ACGAACCCAA CACCACAGTC TACGACCCCA ACAAGCCGGC CCACGTCTTC AAATGGTGTC TTGACCTGAT AACCGATACG AATGGCAATT ACGTCACTCT CAACTACACC CCGGACCGGA ACCAGTTATA CTTGAACGAG ATAGACTACA CCGGCAACGA CCCTGTCACT CATAAACTCC CCCCTACCAA TTCTGTAAAG TTCATCCTCG AAGACCGCAA CGACGCCCCG ACAATGTACA CAACCAACTT TGCCGTCACC ACGGCGAAGC GGCTCAAGAC CATCGAGGTT TGGTCCAACT ATAACACAGT TAACACACAA CCCTTGCGGG TAAGAAAATA TGAACTGAAC TATGATGCCG ACTCGACGAC GACCGGCAAC CAGTACAGTC CACTGACCAA CAGGTCGGTT CTCGGCACGG TGACAGAGTA CGGCAGTGAC GGTACGACCA CAAAGCCGCC TATCACCCTT GGATACTCCA ACGGTTACAC CGTTGCCGGC GGAACATCCA GCGGCGGATG GAGTCTTTCT GACCCTATCG GGGTATCTAT GCCGCTCCCT GTCGGCATGT ACTGCATCCC CGGCAAATTC GGCAGCAGAT TCGATATCCT TTGCTCTACC GGTAGCACCG GGTGGGACCT CAAGTATTTA TTCAACAATC TTGACGTGAA TGGGATATCT TTGCAATGGT TACCTGACGG CAACAAGCCT ACGGATCTTT CCCAGGATTC TTTGGGACAT CAATGCGTTA CCGGCGATTT CAATGGCGAA GGGAAAAACG CCCTTGCCTG CAATTTTGCC AATAACGGGG ACTGGACCAT GGTTTTCCCG GGAGGAGCCG GAGAAATCTG GACTAAAGAA ACCTGGCATA ACGCTCCAAC TGTTCTGCCC ATAACTCAAT GTTTTGGCGG TGATTTCGAC GGCAACGGCA AGTCGGACTT TGCCTGTTAT GCCAGCAATA CCTGGAAAAT GGCGTTGTCC ACCGGCAGCG CATGGGGCAG CAGCCCAGTC CAATGGTCCG ACGGGCCAAC TACCTTCACT TATCCAACCA ACAACTGCCT GACCGGTGAC TTCGACGGCG ACGGCAAAAC CGACTTTGCC TGCAACTCCG GGAACACCAG CACCTGGAAT ATGTACCTCT CCAACGGCAA CGGTTGGACG CCTGCCACTT GGTATAGCAA CGGGATGGCT CCGGACTTCG TCAAATCAAA CTACATCCTG AGCGGAATCT GTATGACTGG AGATTACAAC GGTGACGGCA AGACCGATAT TGCCTGTGCC TCCGGCAGCG GTTTGTGGAA TGTTCAACTG TCAACCGGCA GCAGCTGGGA CACGGCCTCT TTCTCGATGG GCGGCGCCAT CGTCTCCTTT CCAATCAACA CAAAATGCTT GTCCGGCGAT TTCAATGGCG ACGGCAAAAC CGATATTTCC TGCTACACCT CCGGCGGTAT CTGGAGCACG GCTTTATCTC TCGGAAACGG CTGGAACACC CTTTCTTGGG ACGGCGGCCC TTCTCCTGAA ACGTCAGTCA GCCAGCAATG CTTTGCCGGA GACTATAATG CCGATGGCAA GACCGACATC GTGTGCTATC CACATGACAC CTCTTATCCA GGTGGAGCTT TTCATTGGGA ATCGGGCTAT GCCAACGCGC CGTTGACTGA CCTTCTTACG CACGTCTCCA ACGGCCTTGG CGGCGAAATC AGCGTCTCCT ATTCACCCTC CTCATGGTAT GCCCAGCTTC CATTCACCAT GCAACTTATC TCAAGCGTAT CCGTCAGTGA CGGTAACAAC AACACCTCCA CCTCGAACTA TTCCTATTCC GGCGGCTACT ACAATTTCAG TGCAAAGGAC TTTCGCGGCT TCAACTCTGC GAAGGTAATC GGTCCCGGAA AGAACAATGA ACTGACCGTA ACAGAAACAT GGTTTCACCA AGGGGATGAT ACCGCTGTAG ACGTGAACAA CCCATCGGCG ACCGTTGGGT TCATGAAAGG GAAACCTTAC AGGACACGGA TATCTGACGG TCAGGGTAAA GTATATTCCG AAACTGAGAC ATCATACTCG ACTTACACGT CAACCCCTTA CAACTACAGT CCAGCCACCA AGGTAGACAC CTACATCTGT GATGGGCAAG CATACGGGCA GTGCAGGGAT AGTGGTAGCG CTCGACAGAC ACGAACCGTC TACTACTACG ATGATTACCT TACCTCACCT CATGCAAATT ACGGCAATGT GACCCGCGAA GATCGTTATG GTGACATCAT GAATCCTGCT AATGTCTCCC TGAACATGAC CATCGAGAGG CAGTTTTCAC CAAATGTTAC CAACTGGATA GTATCTTTAC CAGCCACTGT TAGCGTTTTC CAAGGCATAG GCGATACAAA TATCGGTACC AACCTGAAGG TCAGCCAGAC GGATTATTAT TACGATGACT TCCCTCTTGC CAATTGCTCT GCCGCCTCCC AATACAATCA TACTCCAACT AATGGGAACC TAACCGTCGT ATCCCGCTGG CTCAATGGTG GCAACAACTC TGAAACCCGG ACGGCTTATG ACGGCTACGG CAATCCGGTA TGCACCCGCG ACCCTAACGG CAACGTAACC ACAACAGGTT TTGACACCAT CTATCAAACT TTCCCTGTCT CAAGCACCAA TGCCAAGACC CAGACGACGA CCTCCGCCTA TTATGGCGTC GGCATAGCCG CCGACAATGG ACGCTTTGGC CAACTGAAGA GTATTTCCGA CCCCAACAAC GCGACCATAA CGGCGGTGTA CGATGTATTC GGCAGAAAGA CAAAGGATAT TCAGCCGGAC CTGTTCTCGA CGAGTACTGC TTATAACTCC TTCGGTACGG TCGGCAGTCA AAACGTTTAT ACCTATAATC AGTTGGGCAT GTGGTCCGCC TCCTATTTCG ACGGCTTGGG ACGGACATTC AAGGTACGGA AAAGCGGGCC TGACAACAAG GTTATCGTCA CCGAAACGGT ATATGACCAA AGAGGAAAGG TGAACAGTGT TTCAGCCCCT TATTTTGAGG GCGTTGAAAC GCCGGTTTAC CGGACTTACA CCTATGACCC GATGGGAAGA GTGACGAGAA CAACCAACCC GGACAACACG TTCACACTGG CCTGCTACAA CGACCTCGTG AGCGTCTTCA TAGACGAAAA CGGCCACCGC AGGCGTGAAA CGCGGGATGC ACTGGGACGT CTTGTTACAG TGGAAGAGTA CACGGGGACC TCCACGACAT GCGACACAAC TCAGAATCCA AGCCAGTTCA CACTTTACGC TACTACCACC TATACTTACG ACGTTCTTGG AAATCTTACG GATGTAATCG ATGCCAACCA GATGGGCGTG CCCGTCGCCA ATCAGAAAAA AACGCACATT GAGTACGACA CCTTGGGGCG GAAAAAGAAC ATGACCGACC CGGACATGGG GTATTGGGAA TACAGCTATC CCCCTGTGTC AGAATAG
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Protein sequence | MIPIRCAGNS LQNAVLVLCL TLSIFFTVNA HAADEKVVGK EVADGTDTSA NSDTPLPDLF TGTMSYRIPI EVPPGRRGVD PGIVLTYRST NGNGWLGVGW ELEMGSIERS TKGGVNYDAS DFLLRGPGGV TELVNLPGTS EYRAKIEGNF IRFINYGTYW EAIDKKGVRF RFGHEPNTTV YDPNKPAHVF KWCLDLITDT NGNYVTLNYT PDRNQLYLNE IDYTGNDPVT HKLPPTNSVK FILEDRNDAP TMYTTNFAVT TAKRLKTIEV WSNYNTVNTQ PLRVRKYELN YDADSTTTGN QYSPLTNRSV LGTVTEYGSD GTTTKPPITL GYSNGYTVAG GTSSGGWSLS DPIGVSMPLP VGMYCIPGKF GSRFDILCST GSTGWDLKYL FNNLDVNGIS LQWLPDGNKP TDLSQDSLGH QCVTGDFNGE GKNALACNFA NNGDWTMVFP GGAGEIWTKE TWHNAPTVLP ITQCFGGDFD GNGKSDFACY ASNTWKMALS TGSAWGSSPV QWSDGPTTFT YPTNNCLTGD FDGDGKTDFA CNSGNTSTWN MYLSNGNGWT PATWYSNGMA PDFVKSNYIL SGICMTGDYN GDGKTDIACA SGSGLWNVQL STGSSWDTAS FSMGGAIVSF PINTKCLSGD FNGDGKTDIS CYTSGGIWST ALSLGNGWNT LSWDGGPSPE TSVSQQCFAG DYNADGKTDI VCYPHDTSYP GGAFHWESGY ANAPLTDLLT HVSNGLGGEI SVSYSPSSWY AQLPFTMQLI SSVSVSDGNN NTSTSNYSYS GGYYNFSAKD FRGFNSAKVI GPGKNNELTV TETWFHQGDD TAVDVNNPSA TVGFMKGKPY RTRISDGQGK VYSETETSYS TYTSTPYNYS PATKVDTYIC DGQAYGQCRD SGSARQTRTV YYYDDYLTSP HANYGNVTRE DRYGDIMNPA NVSLNMTIER QFSPNVTNWI VSLPATVSVF QGIGDTNIGT NLKVSQTDYY YDDFPLANCS AASQYNHTPT NGNLTVVSRW LNGGNNSETR TAYDGYGNPV CTRDPNGNVT TTGFDTIYQT FPVSSTNAKT QTTTSAYYGV GIAADNGRFG QLKSISDPNN ATITAVYDVF GRKTKDIQPD LFSTSTAYNS FGTVGSQNVY TYNQLGMWSA SYFDGLGRTF KVRKSGPDNK VIVTETVYDQ RGKVNSVSAP YFEGVETPVY RTYTYDPMGR VTRTTNPDNT FTLACYNDLV SVFIDENGHR RRETRDALGR LVTVEEYTGT STTCDTTQNP SQFTLYATTT YTYDVLGNLT DVIDANQMGV PVANQKKTHI EYDTLGRKKN MTDPDMGYWE YSYPPVSE
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