| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_1176 |
|---|
| Symbol | |
|---|
| ID | 5163919 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter uraniireducens Rf4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009483 |
|---|
| Strand | + |
|---|
| Start bp | 1386379 |
|---|
| End bp | 1387818 |
|---|
| Gene Length | 1440 bp |
|---|
| Protein Length | 479 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640548680 |
|---|
| Product | nitrogenase molybdenum-iron protein alpha chain |
|---|
| Protein accession | YP_001229953 |
|---|
| Protein GI | 148263247 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2710] Nitrogenase molybdenum-iron protein, alpha and beta chains |
|---|
| TIGRFAM ID | [TIGR01282] nitrogenase molybdenum-iron protein alpha chain
[TIGR01862] nitrogenase component I, alpha chain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAATG CGATAAAGAA AATAGAAGGA ATTACCAAAG AATCTACCCA GGAGATGATT
GATAAGGCTC TTGAGGTATA TCCCGAGAAG GCTAAGAAGA AAAGGGTTCC CCACCTGGCC
CCCAACGACG GCGTGAGCGC CTGCGTGAAA TCCAACCGGA AAACCGTACC CGGCGTCATG
AGCGCCCGCG GCTGCGCCTA TGCAGGCGCC AAAGGGGTGG TCTGGGGACC GATCCGCGAC
ATGGTCCACG TTTCCCACGG TCCGGTCGGC TGCGGCTGGT ATTCATGGGG CACCCGGCGC
AACCTGATGA CCGGCATCAA CGGGGTCAAC CAGTTCGCCA TGCAGTTCAC CTCCGACTTC
CAGGAAAAAG ACATCGTCTA CGGCGGCGAC AAGAAGCTGA AGACCCTGCT TCAGGAGGCC
CACGAGCTTT TCCCCCTGGC AAAAGGGATT TCGGTCCTTT CCGAATGCCC GGTCGGCCTG
ATTGGCGACG ACATAAACTC GGTGGCCAAG CAGTCCTCCA AGGAGCTGGA TATCCCCATC
ATCCCCTGTA ACTGCGAAGG TTTCCGCGGC GTTTCCCAGT CGCTGGGTCA CCACATCTCC
AACGACACGA TCCGCGACCA CATCATCGGC ACGCGGGAAT TCGCAGAACC CGAGACACCC
TATGACATCG CCCTCATCGG CGACTATAAC ATCGGCGGCG ACGTCTGGTC GGTCAAGCCG
CTTCTCGAAG AGATCGGCCT CAACGTCAAG GCAGTCTGGA CCGGCGACGG CGAGCTGGAA
AAAATCGCCG CCACCCACAA GGTAAAACTG AACATCATCC ACTGCTACCG CTCCATGAAC
TACATGTGCC GGGTGATGGA AGAGAAGTAC GGCATCCCCT GGCTGGAGTT CAACTTTTTC
GGCCCGACCA AGATCAGGGA GAGCCTGCGC GCCATTGCCG AGCGTTTCGA CGACAAGATC
AAGGAAAACG TGGAGCGGGT GATCGCCAAG TACGACCCGA TCATGCAGGC GGTGATCGAC
GAATACCGTC CCCGTCTGGA AGGGAAGAAG GTCATGCTCT ACGTCGGCGG TCTTCGTCCC
CGTCATACGG TCAATGCCTA CGCTGACCTG GGGATGGTGG TTGTCGGTTC CGGCTACGAA
TTCGCCCACG GCGACGACTA CGAGCGTACC TCGCCGGAAA TGCCTGAAGC GACGGTCATC
TACGACGACG CATCCGAACA CGAACTGGAG GAGTTTGTCA ACACCCTTCG CCCCGACCTG
GTGGGGAGCG GTATCAAGGA AAAATACCTG TTCCAGAAGA TGGGCGTTCC CTTCCGTCAG
ATGCACAGCT GGGATTACTC CGGCCCGTAC CACGCCTACA ACGGCTTCCC GATCTTTGCC
CGGGACGTTG ATATGGCGGT GAACAGTCCG ACTTGGAAAC TGGTCAAGTC GCCGTTCTGA
|
|---|
| Protein sequence | MSNAIKKIEG ITKESTQEMI DKALEVYPEK AKKKRVPHLA PNDGVSACVK SNRKTVPGVM
SARGCAYAGA KGVVWGPIRD MVHVSHGPVG CGWYSWGTRR NLMTGINGVN QFAMQFTSDF
QEKDIVYGGD KKLKTLLQEA HELFPLAKGI SVLSECPVGL IGDDINSVAK QSSKELDIPI
IPCNCEGFRG VSQSLGHHIS NDTIRDHIIG TREFAEPETP YDIALIGDYN IGGDVWSVKP
LLEEIGLNVK AVWTGDGELE KIAATHKVKL NIIHCYRSMN YMCRVMEEKY GIPWLEFNFF
GPTKIRESLR AIAERFDDKI KENVERVIAK YDPIMQAVID EYRPRLEGKK VMLYVGGLRP
RHTVNAYADL GMVVVGSGYE FAHGDDYERT SPEMPEATVI YDDASEHELE EFVNTLRPDL
VGSGIKEKYL FQKMGVPFRQ MHSWDYSGPY HAYNGFPIFA RDVDMAVNSP TWKLVKSPF
|
|---|
| |