| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_1126 |
|---|
| Symbol | |
|---|
| ID | 5166854 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter uraniireducens Rf4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009483 |
|---|
| Strand | - |
|---|
| Start bp | 1328358 |
|---|
| End bp | 1329902 |
|---|
| Gene Length | 1545 bp |
|---|
| Protein Length | 514 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640548631 |
|---|
| Product | outer membrane efflux protein |
|---|
| Protein accession | YP_001229904 |
|---|
| Protein GI | 148263198 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1538] Outer membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATCTG ATTGGACGAA AACCGTTGTC ATTCTGCTTG CTGCTCTATT CTTTAATTGC
GCCGACAATG CTTTGGCACA GGAAGGCCCG CTGAACCTGT CCATTAAGGA TGCCATCAAG
CTTGCGGTGG AAAAGAACCT GGACGTCAAG GCGGAACTTT ACAACCCCGC CATGGCCGAG
GCGGATATCC GCAGAAACCT CGGGATCTAC GACACCTTGT TGAATGCGCT GACTAACTAC
ACCCACTCCA CCACCCTGCC CGCCAACTTT TTTATTACAG GTGCGACCAC GGACCGCCAG
CAGACAGTGC AATTCAATGC GGGCGCCAGC CAGCTCGTAC AGACCGGCGG CACGGTGGGA
TTGGCCTTCA ACAACATCTG GAACACCAGC AATGCCGATC AGAGAGGAAT AATCGCGAAC
TATTACCAGT CGGACCTCAC CCTTTCCTTC ACTCAGCCGC TCTTGAAAAA CTTCGGCAAG
GAAGCCACCG AGTTGAACAT CAACGCGGCG CGATTTGCCA AGGAAGGGAC GCTCGACCGG
TTCAGAACCA AGCTGAGCGA CACCGTAGCG CAGGTCCGCA ACGAATGCTT CAAGCTCTAT
AGCCTGCGGG AAGACCTGGA AGTAAAGAAA ACTTCTCTCG CCCTGGCACA GAAGATACTC
TCTGATACCC AGGGCCAGGT AAAGGCGGGG GTCCTGCCGG CCATGGAAAT TTTGAATGCT
GAATTCGGCG TTGCCACTCG TGAAAAAGAT ATCATCGATG CCGAGCGGGC GCTCAAAGAC
GAGATGGATT TATTGCGGCT GCTCTTACAA TTGGATAAGG GAAACGATAT TTTTATCACC
GACCTGCCAA CCCGGCAAAG CTACCCGATT GTGGAAGAGG AGGCGCTGGC GCGGGCACTG
GCTGAACGCC CCGAGCTTTT GAATCAACGG GCGACCATCA AAACCAATGA CCTCCAGGCA
CGGGTGGCAA GAAATCGCAC CCTGCCCGAT CTTGCCCTCA ACACCAGTGT CGCCCTTACC
GGCCTGGATC AGCACTACAA CCGTGACATC GAAAAAATAA GTTCCGGCGA CTTTCCGGTC
TGGGGGATCG GCCTTCAGTT AACCTATCCC CTTGGCAATC GTGCAGCGGA AAATGACTAC
ATCAAGAGTA AATTAACCCT TGAGCAGACA CGGACTCAGC TGCAAAGCCT GGAATCCTCC
ATTGCCAACG AGGTAAAAAC CGCCATCAGG GCGCTCCAGT CAAGCTACAA GCAACTGGAA
GTAACCGACC GGGGAAGGGC CTTTGCCGAA GAACGTCTCA ACGCCTTCAT CAAGAAGAAC
AAGGTGGGAC TGGCGACCAC CAAGGACGTA CTCGACGTGG AAAACGACCT GGTAACCGCC
AAGGGTAACC AGATCAAGGC GCTGACGGAC TACAACAACG CAATCACCCA GCTCTGGCGG
TCGACCGGGG AGATATTGGA CAAACAAGGG ATCAAGGTCT CGGATAAGGA AGGAGATTCC
CTTTACGAAA AACTCAGTTC GGCGGACTCG TTCCAGAACA AATAG
|
|---|
| Protein sequence | MKSDWTKTVV ILLAALFFNC ADNALAQEGP LNLSIKDAIK LAVEKNLDVK AELYNPAMAE
ADIRRNLGIY DTLLNALTNY THSTTLPANF FITGATTDRQ QTVQFNAGAS QLVQTGGTVG
LAFNNIWNTS NADQRGIIAN YYQSDLTLSF TQPLLKNFGK EATELNINAA RFAKEGTLDR
FRTKLSDTVA QVRNECFKLY SLREDLEVKK TSLALAQKIL SDTQGQVKAG VLPAMEILNA
EFGVATREKD IIDAERALKD EMDLLRLLLQ LDKGNDIFIT DLPTRQSYPI VEEEALARAL
AERPELLNQR ATIKTNDLQA RVARNRTLPD LALNTSVALT GLDQHYNRDI EKISSGDFPV
WGIGLQLTYP LGNRAAENDY IKSKLTLEQT RTQLQSLESS IANEVKTAIR ALQSSYKQLE
VTDRGRAFAE ERLNAFIKKN KVGLATTKDV LDVENDLVTA KGNQIKALTD YNNAITQLWR
STGEILDKQG IKVSDKEGDS LYEKLSSADS FQNK
|
|---|
| |