Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gura_1105 |
Symbol | |
ID | 5162711 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter uraniireducens Rf4 |
Kingdom | Bacteria |
Replicon accession | NC_009483 |
Strand | + |
Start bp | 1299680 |
End bp | 1300960 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640548606 |
Product | integrase catalytic subunit |
Protein accession | YP_001229884 |
Protein GI | 148263178 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0473204 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACGGAAG AGCAGAAACA ACGGGTGGCG GTGTTCCGTT TCGGGATCAT CCACGACTTT GTAGGCGGCG CCCGCCTGGA CCACGGCGAA CGGGAGCGGC TTCTGCGGGA GAAGTGCGCC CGCAAATGGG AGATTCCCTG TTCCAATCAG ACACGGCTTA GCCGCAGCAC CATTCTGCGC TGGATCGGCC TTTACCTGAA GGAGAGGGGG AAGCTGGAAG CCTTGTACCC CCAGGGAAGA AACGACAGGG GTATGTCGCG TGTGCTGGAC CAGGAGACGG GGCTCGCCTT GGCGCAACTG CGGCGTCAGC AGCCTGAGCT TACCGTTCCC GAGCTGGTCA AGCAGATGCA CGAGCGCCGG CTGGTCACCG ATGGGGTTGG CTTGAGCCTC TCCACCGCCT ATCGGTTTCT GCACCGCCAC GATCTGATGG GAAAGCAACC AGCCCCCGTG GACCGGCGCA AGTTCGAGGC GGAGCTTCCC AACGATCTGT GGCAGAGCGA CGTGATGCAC GGCCCCATGC TGTTAAGCGG CGACAAGCGG CGCAAGACAT ACCTCATCGC CTTCATCGAC GACCACTCAC GGCTGATTCC CCATGGGCGG TTCTACCTCT CGGAAGGAGT TGCCTGCTTC ATGTCCGCCT TCTCCGATGC CGTGCTGAGA AGGGGGCTGC CAAGAAAGCT CTACGTGGAC AACGGCTCGG CGTTTCGCTC CCGCCAGCTG GAATACACGG CCGCCGCCCT GGGCATCGCG CTGGTACACG CACGGCCCTA TCAGCCACAG GGGAAAGGGA AGATCGAAAG GTTCTTCAAA AATGTGCGAA CCAGCTTCCT GCCCTCCTTC AAGGGGGAGA CTCTGGAAGA GATCAACGAA GCCTTCGAGT TGTGGCTTAA CGACTACTAT CATCAACGAA GCCACGGCTC CACGGGAGAG ACCCCGTTCA AGCGCTTCAC CTCCCGCATG GAGTGCCTGC GTCCGGCGCC CGACAACCTC AAGGATTACT TCAGGAAGAC GGTGCGGCGG CTGGTGAACA AGGACCGCTC CGTGGTGGTG GACCGGCGGC TGTTCGAGGC TCCCGTGGAG CTCATCGGCA AGCGAGTGGA ACTGCTCTAC TTCGAGGAGA GCCCCGAGCA GGTGGAGATC CGCTGTGCGG AGAAGTCATA TGGCCTCCTG CGCCAGGTGG ATTTGCACGT CAACAGCCGG GTGAAAAGGG ACAAGAATGG CCAGATCGAA CTGTCAGGCG ACGGTGCCTG CGAGAGCGGC AGGCTGTGGG AGGGAGAGTG A
|
Protein sequence | MTEEQKQRVA VFRFGIIHDF VGGARLDHGE RERLLREKCA RKWEIPCSNQ TRLSRSTILR WIGLYLKERG KLEALYPQGR NDRGMSRVLD QETGLALAQL RRQQPELTVP ELVKQMHERR LVTDGVGLSL STAYRFLHRH DLMGKQPAPV DRRKFEAELP NDLWQSDVMH GPMLLSGDKR RKTYLIAFID DHSRLIPHGR FYLSEGVACF MSAFSDAVLR RGLPRKLYVD NGSAFRSRQL EYTAAALGIA LVHARPYQPQ GKGKIERFFK NVRTSFLPSF KGETLEEINE AFELWLNDYY HQRSHGSTGE TPFKRFTSRM ECLRPAPDNL KDYFRKTVRR LVNKDRSVVV DRRLFEAPVE LIGKRVELLY FEESPEQVEI RCAEKSYGLL RQVDLHVNSR VKRDKNGQIE LSGDGACESG RLWEGE
|
| |