Gene Gura_1083 details

Gene Information

• Locus tag: Gura_1083
• Symbol: rpsE
• ID: 5165638
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter uraniireducens Rf4
• Kingdom: Bacteria
• Replicon accession: NC_009483
• Strand: +
• Start bp: 1280904
• End bp: 1281392
• Gene Length: 489 bp
• Protein Length: 162 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 640548584
• Product: 30S ribosomal protein S5
• Protein accession: YP_001229862
• Protein GI: 148263156
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0098] Ribosomal protein S5
• TIGRFAM ID: [TIGR01021] ribosomal protein S5, bacterial/organelle type

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 0.237908
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGCTTAAGA TCAATCCCAA TGACATTAAT CTTACGGACA GGGTAGTTCA TATCAGCCGT 
GTTGCAAAGG TTGTGAAAGG TGGCCGTCGT TTTAGTTTTT CAGCGCTCGT AGTGGTGGGC 
GATGGAAATG GCTATGTCGG TTATGGCCTC GGCAAGGCTA ATGAAGTCCC TGAAGCGATT 
CGAAAAGGTG TTGAACAGGC GAAGAAGAAT CTTATCAAGG TGCCGATTGT TGAAGGGCAA 
ACTATTCCTT TCGAGATCGA AGGACGATTC GGCGCTGGAA AAGTATTGAT GATGCCTGCC 
TCTGCTGGTA CTGGTGTGAT AGCCGGTGGT GCAGCGAGGG CTGTATTTGA ATCGGCTGGT 
GTTCATAATA TACTTGCTAA ATGCCTTGGA TCCAATAACC CGCATAACGT TGTGAAAGCC 
GCTTTTGCCG GTCTTATGAG ACTAAAGACC CCTGAAGAGC TAAGTGCTAG AAGAGGTCTG 
GCTGAGTAA 

 

Protein sequence

MLKINPNDIN LTDRVVHISR VAKVVKGGRR FSFSALVVVG DGNGYVGYGL GKANEVPEAI 
RKGVEQAKKN LIKVPIVEGQ TIPFEIEGRF GAGKVLMMPA SAGTGVIAGG AARAVFESAG 
VHNILAKCLG SNNPHNVVKA AFAGLMRLKT PEELSARRGL AE