| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_1062 |
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| Symbol | |
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| ID | 5163415 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter uraniireducens Rf4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009483 |
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| Strand | + |
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| Start bp | 1264567 |
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| End bp | 1268700 |
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| Gene Length | 4134 bp |
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| Protein Length | 1377 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640548563 |
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| Product | DNA-directed RNA polymerase, beta' subunit |
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| Protein accession | YP_001229841 |
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| Protein GI | 148263135 |
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| COG category | [K] Transcription |
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| COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
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| TIGRFAM ID | [TIGR02386] DNA-directed RNA polymerase, beta' subunit, predominant form |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00183724 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGAAGATA TCTTTAATTT CTTTGATAAA CCGAAGGATC CGTTGCATTT TTCAGCCATA
AGAATCTCCG TTTCGTCGCC GGAAAAGATC CGGGAGCGTT CCTTTGGAGA GGTGAAAAAG
CCGGAAACTA TCAACTATCG GACGTTTAAG CCGGAACGGG ATGGACTTTT CTGTGCAAAA
ATATTCGGTC CGACCAAGGA TTACGAGTGC AACTGCGGTA AATACAAGCG GATGAAGCAT
CGCGGTATCG TCTGCGAAAA GTGCGGTGTG GAAGTCATCC CTTCGAAGGT CCGGCGCGAG
AGACTCGGCC ATATTGATTT GGCAACGCCT GTGGCCCACA TCTGGTTCCT TAAGTCGCTC
CCTTCGCGGA TCGGGAACCT GATGGACATT ACCCTCAAGG ATCTTGAAAA GGTTCTTTAT
TTCGAGGCCT ATGTAGTTAC TGATCCGAAG AATACCGGCA TGCCGTTTGC GCAGGTTTTT
TCGGAAGACC AATACCAGAA GGCGCTGGAG GAGTATGGCG GCCAATTCGA AGCCGGAATG
GGTGCTGCTG CCATAAGGGA ATGCCTCAAG TCCATGGACT TGGATGTCAT TGCCGATCAG
CTTCGCGTGG AAATGCTCGA GGCTACCAGC GAAGCCAAAC GGAAAAAAAC CGCCAAGCGC
TTAAAAGTGG TTGAGGCGTT CAAGTCTTCC GGCAACAAGC CGGAGTGGAT GATTCTGGAG
TGCATCCCCG TGCTGCCTCC CGAACTTCGC CCCCTTGTTC CTCTCGATGG CGGCCGCTTT
GCAACTTCAG ACCTCAATGA CCTCTATCGT CGGGTAATCA ACCGTAACAA TCGCTTGAAA
CGGCTCATGG AGCTACAGGC ACCTGAGGTT ATTATCCGCA ATGAGAAGCG TATGCTTCAA
GAGGCGGTTG ACGCCCTCTT TGACAATGGT CGTCGCGGCC GTGCCATCGC AGGTCCCAAC
AAACGTCCGC TCAAGTCTCT TTCGGATATG CTCAAGGGGA AATCCGGCCG CTTCCGTCAG
AACCTTCTTG GTAAACGTGT TGATTACTCC GGTCGTTCGG TTATTGTTGT CGGCCCGGAA
TTGCGGCTGC ACCAGTGCGG TCTGCCGAAA AAGATGGCGC TTGAGCTCTT CAAGCCGTTC
ATTTACAACA AGCTCGAGGA AAAAGGCTAT GTAACCACCA TCAAGAGCGC CAAGAAAATG
GTGGAAAAGG AACGGCCGGA AGTATGGGAC GTCCTTGAAG AGGTGATAAA AGAACATCCG
GTCATGTTGA ACCGTGCGCC GACCCTTCAC CGCCTTGGCA TACAGGCCTT TGAACCGGTA
TTGATCGAAG GTAAGGCGAT CCAGTTGCAT CCGCTGGTAT GTACTGCTTT TAATGCGGAC
TTTGACGGTG ACCAGATGGC TGTGCACCTG CCGCTGTCAG TCGAAAGTCA GGTTGAGACA
CGCGTTCTCA TGATGAGTAC CAACAATATC CTCTCACCTG CCCACGGCAA ACCGATTATT
GTGCCGTCGC AGGATATGGT CCTTGGTATT TATTACATGA CCAGGGATAA GTATTTCGCC
AAGGGAGACG GGAAGATCTT TGCTTCACAG GAAGAAGTGA GAATTGCCCT CGATGCGGAT
GAAGTTGATT TGCAAGCTCG CGTCAAGGTT CGCTTGAAGA ATCTTGTTAC GGACGATAAG
CCGTTGATCG TGGAGACTAC CCCTGGTCGT GTGGTTCTCA GGGAAATATT GCCTGACGCC
GTTCCGTTTG CCACCATCAA CAAGGTAATG ACCAAGAAGG AACTCTCCAA CCTTGTAGAC
GTCTGCTACC GTCTAGCCGG CAACAAGGAG ACCGTTATCC TGGCTGACAA ACTGAAATCT
ATCGGCTTCC GTTATTCTAC CATTGCCGGT ATCTCTATCA GTATCAATGA CATGGTCATC
CCTGAGGGAA AACCTGCAAT CATTGGTCGC GCTTCTGAAG AGGTTAAAGA GATTCAGAAT
CAGTACACCG AGGGTCTCAT AACCGACGGC GAACGCTATA ACAAGGTTAT CGATATCTGG
GCAAAATCAA CGGAAGAAAT TGCCAAAGAG ATGCTCGACA ACCTTTCGCG AGACATCGTT
GTTGCTCCTG ACGGTAAAGA AGTCAAGGTT CCTTCATTCA ACGCCATTCA TATGATGGCA
GACTCGGGTT CCAGGGGTTC TGCACAGCAG ATTCGCCAGT TGGCCGGGAT GAGGGGGCTC
ATGGCCAAGC CTTCCGGCGA GATCATTGAA ACCCCGATTA CCGCCAACTT CCGTGAGGGG
TTGACAGTGC TTCAGTACTT CATTTCAACT CACGGTGCCC GCAAGGGTCT CGCCGATACC
GCACTTAAGA CGGCCAACTC CGGTTATCTG ACCAGAAGGC TGGTTGACGT TGCTCAGGAC
GCAATTATTA CTGAGACTGA CTGTGGTACC CTTGACGGCT TGACGGTTTC CTCATTGACA
GAAGGTGGTG AAGTTATCGA GCATATTGGC GATAGGATTC TCGGTCGTGT TGCGTTGGAT
GACATCCTCG ATCCTGTTAC CGGAGATGTT CTTGTGCCGG CAAATGAAGA GATCGATGAA
ACGCTGGTAC AAAAAATTGA ATCAGCCGGC TTGGAAAAAG TCAAAATCCG TTCCGTGCTC
ACCTGCCAAA GCAGGCGGGG GATCTGCGCC AAGTGCTACG GGCGTGACCT TGCACGGGGG
CACCTGGTCA ATATGGGCGA GGCGGTTGGC GTTATTGCAG CCCAATCCAT CGGCGAACCT
GGTACCCAGT TGACTATGCG GACCTTCCAC ATAGGTGGTA CTGCATCGAG ACGTGCTGAA
CAGACCTCTT TGGAAGCGCG TAACGAAGGC TCTATCAAGT TTATAAATAT TAATTATGTT
ACAAATTCCG AGGGTCATCA CATCGTTATG AACCGTAACG GTGAACTTGC CATCATAGAT
GAAACCGGCC GCGAGCGGGA AAAGTACGCC ATCGTCTACG GGGCCAAAAT CAAGGTTAGT
CCAACTAAGT TAATTAAGCA GGGTGAAGCC TTGGCTGAGT GGGACCCTTA CACCATGCCG
ATCCTGACCG AGATCGCCGG TAAGGTGAAG TTCGGGGACA TCCTCGAAGG TGTCACCATG
GAGGAACAGG TAGACGAAGT AACCGGCCTT TCGCGTAAGG TTGTTGTTGA GTCGCGCGAT
GCCGATAAAC GGCCGCGCAT TACCATCAAG GATGAAACCG GGAAGACCGC AAAAATCCAT
GAAGGTACAA TGGGGCGCTA CTATCTTCCC GTTGGTGCAA ACATTACGGT GCAGGAAGAT
TCGATCGTCA ATGCAGGTGA CGTAATTGCC AAGATCCCTC GCGAGACTAC CAAGACAAAG
GATATCACGG GTGGTCTGCC CAGGGTTGCG GAACTCTTCG AAGCAAGAAA GCCGAAGGAT
TTTGCGGTTA TATCTGAAAT CGACGGGGTT GTTACGTTTG GTAAGGACGC TAAAGGCAAG
CGCAAGGTCA TTGTAACCCC GGATATGGGC GAACCCAAGG AATACCTGAT CCCCAAAGGC
AAGCACATAA GTGTCCACGA AGGGGATCAT GTGCGGGCCG GTGAGGCCCT CATGGACGGA
TCTTCAAATC CGCATGATAT CCTGAGGGTC CTCGGTCAGA AGGAATTGGC CAAATACCTT
GTGGATGAAG TTCAAGAGGT CTATCGGCTC CAGGGGGTCA AGATCAATGA TAAGCATATT
GAGACCATTG TCAGGCAGAT GTTGAGACGT GTACGGATTA AGGAGGTCGG CGATACGACG
TTGCTGATCG ATGACCAACT GGAACGCTAT ATCTTTGAAG ACGAGAATGA AAGGGTACTC
GATAAAGGCG GTAGACCAGC CATTGCTGAG CCTCTTCTCC TTGGCATAAC AAAGGCATCG
CTTTCGACGG AGTCATTTAT TTCGGCAGCA TCCTTCCAGG AGACAACAAA GGTCTTGACA
CAGGCTTCAA TAGAAGGTAA AGTTGACAGT CTTCGCGGTC TCAAGGAGAA CGTGATCATG
GGGCGGCTCA TTCCTGCCGG GACTGGCTTG GCGCGTTATC GTAATCTCAA GCTTGTTGTA
GAGGATTCCG GTGGTGTGTC GCCGCAGCCG GTTGAGGAAG TTTCGGCTGG TTAG
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| Protein sequence | MEDIFNFFDK PKDPLHFSAI RISVSSPEKI RERSFGEVKK PETINYRTFK PERDGLFCAK
IFGPTKDYEC NCGKYKRMKH RGIVCEKCGV EVIPSKVRRE RLGHIDLATP VAHIWFLKSL
PSRIGNLMDI TLKDLEKVLY FEAYVVTDPK NTGMPFAQVF SEDQYQKALE EYGGQFEAGM
GAAAIRECLK SMDLDVIADQ LRVEMLEATS EAKRKKTAKR LKVVEAFKSS GNKPEWMILE
CIPVLPPELR PLVPLDGGRF ATSDLNDLYR RVINRNNRLK RLMELQAPEV IIRNEKRMLQ
EAVDALFDNG RRGRAIAGPN KRPLKSLSDM LKGKSGRFRQ NLLGKRVDYS GRSVIVVGPE
LRLHQCGLPK KMALELFKPF IYNKLEEKGY VTTIKSAKKM VEKERPEVWD VLEEVIKEHP
VMLNRAPTLH RLGIQAFEPV LIEGKAIQLH PLVCTAFNAD FDGDQMAVHL PLSVESQVET
RVLMMSTNNI LSPAHGKPII VPSQDMVLGI YYMTRDKYFA KGDGKIFASQ EEVRIALDAD
EVDLQARVKV RLKNLVTDDK PLIVETTPGR VVLREILPDA VPFATINKVM TKKELSNLVD
VCYRLAGNKE TVILADKLKS IGFRYSTIAG ISISINDMVI PEGKPAIIGR ASEEVKEIQN
QYTEGLITDG ERYNKVIDIW AKSTEEIAKE MLDNLSRDIV VAPDGKEVKV PSFNAIHMMA
DSGSRGSAQQ IRQLAGMRGL MAKPSGEIIE TPITANFREG LTVLQYFIST HGARKGLADT
ALKTANSGYL TRRLVDVAQD AIITETDCGT LDGLTVSSLT EGGEVIEHIG DRILGRVALD
DILDPVTGDV LVPANEEIDE TLVQKIESAG LEKVKIRSVL TCQSRRGICA KCYGRDLARG
HLVNMGEAVG VIAAQSIGEP GTQLTMRTFH IGGTASRRAE QTSLEARNEG SIKFININYV
TNSEGHHIVM NRNGELAIID ETGREREKYA IVYGAKIKVS PTKLIKQGEA LAEWDPYTMP
ILTEIAGKVK FGDILEGVTM EEQVDEVTGL SRKVVVESRD ADKRPRITIK DETGKTAKIH
EGTMGRYYLP VGANITVQED SIVNAGDVIA KIPRETTKTK DITGGLPRVA ELFEARKPKD
FAVISEIDGV VTFGKDAKGK RKVIVTPDMG EPKEYLIPKG KHISVHEGDH VRAGEALMDG
SSNPHDILRV LGQKELAKYL VDEVQEVYRL QGVKINDKHI ETIVRQMLRR VRIKEVGDTT
LLIDDQLERY IFEDENERVL DKGGRPAIAE PLLLGITKAS LSTESFISAA SFQETTKVLT
QASIEGKVDS LRGLKENVIM GRLIPAGTGL ARYRNLKLVV EDSGGVSPQP VEEVSAG
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