Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gura_1048 |
Symbol | truA |
ID | 5166390 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter uraniireducens Rf4 |
Kingdom | Bacteria |
Replicon accession | NC_009483 |
Strand | + |
Start bp | 1250158 |
End bp | 1250892 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640548544 |
Product | tRNA pseudouridine synthase A |
Protein accession | YP_001229827 |
Protein GI | 148263121 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0101] Pseudouridylate synthase |
TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000000774285 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCCAGA TAAAGCTGAT AATAGAATAC GACGGCACCA ATTATTCCGG CTGGCAGGTC CAGCCGAACG GCATCACCAT CCAGCAACTG ATTGAAGCGT CACTGGCAAC GATGCTCGGC GAACCGGTCA AGCTTCATTC ATCCGGCAGG ACCGATGCCG GTGTTCATGC GCTGGGAATG GTTGCTGCGT TTAAAACGGG GAAACTGCTG CCGTTGCGTG CCTTTTCCGA CGGGCTCAAT GCTTTGCTGC CGAACGATAT AGCCATCAGG GATGCCGTTG AGGCCCCGCT TTCGTTCAAT CCACGCGCTG ACGCAAAGAG CAAGCATTAC CGTTACACGA TATATAACGC CGTTCGCCGC TCGCCACTGG CACGCCTCAG TTCGTGGCAT CTGCGCGGGG CACTGGACAT TGAGCGTATG CAGGCCGCGG CTTCCCATTT TGTCGGTGAG CATGATTTTG CCGCTTTCCG CGCCTCCAAC TGCGCAGCCA AAACCACGGT GCGCCGTCTT TTCAGCGTAT CTGTTGCGAA GGATGGGGAA TCTGTCATTA TTGATGTGCA CGGATCGGGG TTTCTGAAAA ATATGGTGAG GATCATCGCC GGTACGCTCG CAGAGGTAGG ACAGGGGAAA AAAAATCCGG ATGCGGTTCC CGGATTACTT GTTTCAGGCG ACAGGGCCGC TTCAGGCATT ACGGCGCCGC CGCAAGGGCT CTGTCTCGTG GAAGTTTTTT ATTGA
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Protein sequence | MRQIKLIIEY DGTNYSGWQV QPNGITIQQL IEASLATMLG EPVKLHSSGR TDAGVHALGM VAAFKTGKLL PLRAFSDGLN ALLPNDIAIR DAVEAPLSFN PRADAKSKHY RYTIYNAVRR SPLARLSSWH LRGALDIERM QAAASHFVGE HDFAAFRASN CAAKTTVRRL FSVSVAKDGE SVIIDVHGSG FLKNMVRIIA GTLAEVGQGK KNPDAVPGLL VSGDRAASGI TAPPQGLCLV EVFY
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