| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_1042 |
|---|
| Symbol | |
|---|
| ID | 5165826 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter uraniireducens Rf4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009483 |
|---|
| Strand | + |
|---|
| Start bp | 1243740 |
|---|
| End bp | 1245101 |
|---|
| Gene Length | 1362 bp |
|---|
| Protein Length | 453 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640548538 |
|---|
| Product | outer membrane efflux protein |
|---|
| Protein accession | YP_001229821 |
|---|
| Protein GI | 148263115 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1538] Outer membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACGCAT TCTATAAGGT AGTAACGGTA TCCTTTCTCG TAATGTGTTG TTGCTCGAAG
CCCTGTTTTG CCGAGGAACC GGGGCAGGGG AAGCTGGTTC TGGGGCTTAA CGCCTGCATT
CAGCGGGCGC TCGCCTTTGC ACCGGAGTTG GGCGAAACCA GGGCCGATAT CGAGCTGGCC
GCCTCGAAGC TGGCTGAGGC CAAATCGAGC CGCTTTCCGC GGATCGAGCT CTTGAATCTC
ATCGGTCCGG TTCCCCAGGC GCGTGGCAAC CAAGTGTCCT CGCCCGACAG AATAAACCAG
ACGGACCGCT TGACATGGTT TGACCGGGCT GACGCCACCA TTGTCCAGCC GCTTTATACC
TTCGGCAAGA TTAGCGAGAG CATGAAGGCG GCCGGGCACG GCATCGAAGT GGACCGGGCG
AAGCAGGAGC AGAGGCAGAA CGAGATAGCC CTGAAGGTCA AGGAGTACTA CTATGGACTG
CTCCTTGCCC GCGAGTTGAA GGAAATGGTG CTGGATGTCC GGGAAAGCCT GACCAAGGCA
AGGGACAAGG CCCGGAAACT CCTCAAAGAG GAGTCCCCCA ATGTGGAAGA GCTTGATATC
TTTAAGCTCG ATGCGTTTGC CGGAGAGGTC GACAAGTACC TGGAAGAGGC GAACAAGGGG
GCAGCGTTGG CTCTCTCGGC CCTGCGCACC CAGATAGCCC TCCCTGCCGA GGTGGAGATG
GACATAGAAA CCGAGCGGCT TACTGCTGAC GAAGTCAAGG TTCCGGACCT GCCCCTTTTT
CTGGAGGCCT CCAAGGCGAA GCGTCCCGAA TACAAACAGA TAAAGCAGGG GTTGCGAGCC
AGGGCGGCCC TGGTTGAAGC CGCGACGGCC GCTTACTATC CCGACATCTT CCTTGGCGGC
TATCTTTCCG CTGCCTACGC GGAGAAGCGT GACAGGGTTT CCAACCCCTG GGTGCCCGAC
CAGTTCAACC ATTTCTGGGC TGGTGTGGCG TTGGGCCTCA AGTGGAACCT CGACTTCGGC
ATTACGGGGG CCAAAGTGGC TGCGGAGCGG GCCCAGTACA ACCGACTGGT CGCCACCCGG
GAATTTGCCG AAAACAACAT CCCTCTGCAG ATAAAGAAGT CATACCTGGA GATCCATGAG
GCTGAAAAAA GCATCGAGGC GACCCGCTTC GCTTACACGA ATGCCAAAAA GTGGGTAGTG
GCGGCCATTG CCAATTTCGA TTTCGGCGTT GGGCCGGCAA AGGAAATATT CGATGCGCTT
CAGAATTATG CCAGGATGCG CGCTGGCTAT TTCCAGTCGA TCTATAACTT CAAACTGGCC
CAGGCCAATC TGGCCTATGC GGTGGGTGAA GCGCCGCTGT AA
|
|---|
| Protein sequence | MDAFYKVVTV SFLVMCCCSK PCFAEEPGQG KLVLGLNACI QRALAFAPEL GETRADIELA
ASKLAEAKSS RFPRIELLNL IGPVPQARGN QVSSPDRINQ TDRLTWFDRA DATIVQPLYT
FGKISESMKA AGHGIEVDRA KQEQRQNEIA LKVKEYYYGL LLARELKEMV LDVRESLTKA
RDKARKLLKE ESPNVEELDI FKLDAFAGEV DKYLEEANKG AALALSALRT QIALPAEVEM
DIETERLTAD EVKVPDLPLF LEASKAKRPE YKQIKQGLRA RAALVEAATA AYYPDIFLGG
YLSAAYAEKR DRVSNPWVPD QFNHFWAGVA LGLKWNLDFG ITGAKVAAER AQYNRLVATR
EFAENNIPLQ IKKSYLEIHE AEKSIEATRF AYTNAKKWVV AAIANFDFGV GPAKEIFDAL
QNYARMRAGY FQSIYNFKLA QANLAYAVGE APL
|
|---|
| |