| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_0979 |
|---|
| Symbol | |
|---|
| ID | 5163030 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter uraniireducens Rf4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009483 |
|---|
| Strand | - |
|---|
| Start bp | 1160419 |
|---|
| End bp | 1161231 |
|---|
| Gene Length | 813 bp |
|---|
| Protein Length | 270 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640548475 |
|---|
| Product | pyrroline-5-carboxylate reductase |
|---|
| Protein accession | YP_001229758 |
|---|
| Protein GI | 148263052 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0345] Pyrroline-5-carboxylate reductase |
|---|
| TIGRFAM ID | [TIGR00112] pyrroline-5-carboxylate reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.000628805 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGAAGG ACAAGAAAAT CGGTTTCATT GGCGGAGGTA ACATGGCAGA GGCCCTTATC
AAGGGGCTCC TGGCAGGAGG CATGCCGGCA AAGGAACTTG CGGTGGCTGA GCCGGCAGCA
GGGCGTCGGG AATTTCTCCG GGAGCGCTAC GGCGTTAATG TCTCCAATGA CAACAATGCC
GTTGCAGCCG ACTGTGACGT GATAATACTC TCCGTCAAGC CGCAGGTCTG CAGCGAGGTA
CTGGACGGCA TAAAGGGCTC AATCAGTCCC GACAAGCCCA TCATATCCAT CCTGGCCGGT
ATAACTACAA CCGCCATCGA GGCCATGTTG TCGGGGACAC CGCGGATTGT GCGGGTCATG
CCCAATACAC CGGCACTGGT GATGGAAGGC GCCTCCGCCA TCAGCAAAGG CGCCCACGCC
ACCGGCGACG ACATCTCCCT TACCCGCCAT ATCTTCGAAC TGGTGGGCAA GGCCTGGGTA
GTGGAAGAAA AGTTGCTGGA TGCGGTCACC GGCCTTTCAG GCAGCGGCCC GGCCTACGTC
CTCACCTTTA TCGAGGCGCT CTCCGATGCC GGGGTCAAAA ACGGCCTTTC CCGCGACATC
GCCACCGGCC TTGCCGCGCA AACGGTATTC GGCACAGCCA GGCTCCTGCT CGAAACCCGT
GAACACCCCG CCGTGCTCCG CGACAAGGTG ACTTCCCCCG GAGGCACAAC CATTGCCGGC
ATGCACGCCC TGGAAAAGGA CGGGTTCCGC AGCGCCGTCA TCAACGGCGT GGATGCCGCG
ACCGCTCGTT CCATGGAACT CGGCAAGAAA TGA
|
|---|
| Protein sequence | MLKDKKIGFI GGGNMAEALI KGLLAGGMPA KELAVAEPAA GRREFLRERY GVNVSNDNNA
VAADCDVIIL SVKPQVCSEV LDGIKGSISP DKPIISILAG ITTTAIEAML SGTPRIVRVM
PNTPALVMEG ASAISKGAHA TGDDISLTRH IFELVGKAWV VEEKLLDAVT GLSGSGPAYV
LTFIEALSDA GVKNGLSRDI ATGLAAQTVF GTARLLLETR EHPAVLRDKV TSPGGTTIAG
MHALEKDGFR SAVINGVDAA TARSMELGKK
|
|---|
| |