| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_0971 |
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| Symbol | |
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| ID | 5162933 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter uraniireducens Rf4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009483 |
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| Strand | + |
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| Start bp | 1152744 |
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| End bp | 1153943 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640548467 |
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| Product | tRNA pseudouridine synthase D, TruD |
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| Protein accession | YP_001229750 |
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| Protein GI | 148263044 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0585] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00094] tRNA pseudouridine synthase, TruD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGAAAA CCTATCTGAC AGCCGATCTG CCCGGCACGG GCGGGACGAT CAAGGAGACG
CCCGAGGACT TTCTCGTGGC GGAGATTCCG CTCTACCTAC CCTGCGGCGA AGGGGAGCAT
ACTTTTGCCG AGATCGAGAA ACGGGGCATT ACGACCCTTG AAGCTCTCCG GCGCCTGGCG
AAGGCGCTCG GCATCGCCGA ACGGGACATG GGGTATGCGG GCATGAAGGA TGCGCGAGGG
GTAACCCGGC AGACCTTCTC GATTCCGCGG GTGGCCCCGG ATCGCGTGCT CGGGCTGGAG
GTGCAGGGGA TCAGGGTGCT CTCCGCGTCT CTGCACAGGA ACAAGCTGAA GCTCGGCCAC
CTGCGGGGGA ACCGTTTCCG GCTCCGGGTC CGCGGGGTGA CAGCCGATGC CGTGCCGAGC
GCATCTGCGG TGTTGTCGGT GCTGGCGAAG CGGGGTGTGC CGAATTATTT CGGCGAACAG
CGCTATGGAA CCCAGGGAAA TTCCCACCTC ATCGGCGCGG CGCTCCTGCG AGGCGATTAC
CGGGGGGCGG TGGACGCACT CATCGGCGAT GCGGCAAAGG TGACTGACGA ACGCTGGCGG
GCTGCCATCG AGGCATACCG GCGCGGTGAT CCGGACGAGA GCCTGCGTGC CTTTCCCGGC
CATTGCCGTA CGGAACGGGA CCTGCTCCAG CGCCTGGTGA AACAGCCGGA TGACTGGGAG
AAGGCGTTCC GCGCGGTGCA TCCACGATTG AAGAAGCTGT ACCTGTCCGC CTTTCAGTCG
TTTCTCTTTG ACCGGCTGCT CGACGGGCGG CTCGACCGGC TTGATGAGGT GGTAGACGGC
GACGTGGCCT ACAAGCATGA CAACGGTGCC TGTTTCCTCG TTACCGATGC GGCTGCCGAA
GCGGTAAGGG CTGAGGCGTT CGAGATATCC CCCACCGGCC CCCTGTTCGG CTGCAAGATG
AAGGAGCCGG AAGGAAAGGT GCTGGAGCTG GAGCGACAGG TACTGGATAT GGAAGGGCTC
AGCCTGGAAA GTTTCAACCT GACCGGCGGC CTGCGCATGG AAGGTGAGCG CCGTCCGCTC
CGGGTGCCGC TTATGGAGCC GACTGCGGAG TGGGACGGGG AGGGGCTCGT GCTGGAGTTC
GGCTTGCCGC GCGGCTCTTA TGCTACCGCA GTGCTGCGGG AAGTGATGAA ATCGGCCTGA
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| Protein sequence | MLKTYLTADL PGTGGTIKET PEDFLVAEIP LYLPCGEGEH TFAEIEKRGI TTLEALRRLA
KALGIAERDM GYAGMKDARG VTRQTFSIPR VAPDRVLGLE VQGIRVLSAS LHRNKLKLGH
LRGNRFRLRV RGVTADAVPS ASAVLSVLAK RGVPNYFGEQ RYGTQGNSHL IGAALLRGDY
RGAVDALIGD AAKVTDERWR AAIEAYRRGD PDESLRAFPG HCRTERDLLQ RLVKQPDDWE
KAFRAVHPRL KKLYLSAFQS FLFDRLLDGR LDRLDEVVDG DVAYKHDNGA CFLVTDAAAE
AVRAEAFEIS PTGPLFGCKM KEPEGKVLEL ERQVLDMEGL SLESFNLTGG LRMEGERRPL
RVPLMEPTAE WDGEGLVLEF GLPRGSYATA VLREVMKSA
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