| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_0879 |
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| Symbol | |
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| ID | 5162652 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter uraniireducens Rf4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009483 |
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| Strand | + |
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| Start bp | 1043702 |
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| End bp | 1045132 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640548375 |
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| Product | protease Do |
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| Protein accession | YP_001229658 |
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| Protein GI | 148262952 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000781376 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATCC GTATTATTAT TTTTTTGTTG ATGCTGGCCA CCCTTCTTTC GGCTTGCAAA
AAGAAGGAAG AAGCCTATTT CTTTGAATCA AACCGCAAAG GGACTGCCGA GGCCCCGGTA
AAAGAAGTAC CCAAGGACAT CCTTGCCACC CAGCAGGCTT TCGCCAATGT GGTAAAAGCG
GTTAACCCGG CAGTGGTCAA TATTTCCACG GTGAGCAAGA AAAAGCTCGT GCAGCCGTTC
TTCGAGATGT CCCCCCTTTT CGATGATTTT TTCGGCGGCA GGGGTGGGAC GCCCCAATAC
CGCCGTGAAA ACAGCCTGGG TTCCGGCTTT ATCATCAACC GGGACGGATA CATCATCACC
AACGATCATG TGGTGCGGGA TGCGGAGAGC ATCCAGGTAA AACTTTCCAA CGAAAATGTT
TATAGCGGCA AAGTGGTCGG CAGCGATCCC AAAACCGACA TCGCGGTGAT CAAGATCAAC
GCCAAGGAAC AGCTCCCGGT GGCAGTGCTG GGCGATTCCG ACAAACTCCA GGTAGGACAG
TGGGCCATTG CTATCGGCAA CCCGTTCGGT CTCGACCGGA CCGTTACCGT CGGGGTGGTG
TCGGCGACCG GCCGTTCCAA TATGGGGATC GAAACCTACG AGAACTTCAT CCAGACGGAC
GCTTCCATCA ACCCGGGCAA TTCCGGCGGA CCGCTCTTGA ATGTCTATGG CGAGGTAATC
GGCATCAATA CTGCCATTGT AGCGGCAGGC CAGGGCATCG GCTTCGCCAT TCCCATAAAT
ATGGCGAAAC GGGCAGTGCC GCAGTTGATA AAAAAGGGGA ATGTCAGCCG CGGTTGGCTG
GGTGTTTCCA TTCAGCCGGT GACGGAAGAG ATTGCCCAGT CCTTTGGCTT GAAACGGGCA
CAAGGTGCCT TGGTGAGCGA TATAATGGCG GGGAGCCCTG CTGCCAAGGC CGGCCTCAGG
CAGGGTGACA TCATAACCGG GATTGCCGGC AAAGAGATAA AGTCCGTCCA GCAACTCCAG
TTGCTGGTGG CTGATATGCC GGTCGGCTCT CCGGTGGAGA TAGAGGTTTT CCGCGAAGGC
CGGGCAAAAA AACTTTCAAT CATCCCTGCC TCCGCTGACA GTGCCGCGGG TGCGAAGCCT
AAATCGGTCG AGACGGAAAC GGCATGGGTC GGATTGTCGG TAGAGGAACT CCCCCGTGAT
ATACGACTGA AGGGTCTGCA GGGTGTTGTC GTGACGAGCG TTGAGCCGGG CAGCCTTGCT
GCCGACAGCG GCATCCAGCA GGGCGATGTC GTTGTTTCAG TCAACCAGAG AAAGATCGCC
GGTGTGAACG ACTATGCAAA GGCCATGAAA GATGCTGAAA AGAAAGGGTC CGTAGCCCTG
CTGGTAAGGC GGGGGGATGC CAGCATCTAT TTTGCGATCA GAATAAAGTA G
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| Protein sequence | MKIRIIIFLL MLATLLSACK KKEEAYFFES NRKGTAEAPV KEVPKDILAT QQAFANVVKA
VNPAVVNIST VSKKKLVQPF FEMSPLFDDF FGGRGGTPQY RRENSLGSGF IINRDGYIIT
NDHVVRDAES IQVKLSNENV YSGKVVGSDP KTDIAVIKIN AKEQLPVAVL GDSDKLQVGQ
WAIAIGNPFG LDRTVTVGVV SATGRSNMGI ETYENFIQTD ASINPGNSGG PLLNVYGEVI
GINTAIVAAG QGIGFAIPIN MAKRAVPQLI KKGNVSRGWL GVSIQPVTEE IAQSFGLKRA
QGALVSDIMA GSPAAKAGLR QGDIITGIAG KEIKSVQQLQ LLVADMPVGS PVEIEVFREG
RAKKLSIIPA SADSAAGAKP KSVETETAWV GLSVEELPRD IRLKGLQGVV VTSVEPGSLA
ADSGIQQGDV VVSVNQRKIA GVNDYAKAMK DAEKKGSVAL LVRRGDASIY FAIRIK
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