Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gura_0878 |
Symbol | |
ID | 5162744 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter uraniireducens Rf4 |
Kingdom | Bacteria |
Replicon accession | NC_009483 |
Strand | - |
Start bp | 1042847 |
End bp | 1043437 |
Gene Length | 591 bp |
Protein Length | 196 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640548374 |
Product | cupin 2 domain-containing protein |
Protein accession | YP_001229657 |
Protein GI | 148262951 |
COG category | [S] Function unknown |
COG ID | [COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000000206175 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGAGA TAAAACCTGA AATTCGCGAA CTAAAGTTGG GGGAGAAGGC CAGAAAACTG AGGCAGGAGA GAAGGCTCAC CCTGCAGGAG CTCGCCGAAT TGACAGGCTT GTCAAAACCC CTCCTGTCGC AGATTGAAAA CGATCAGGTC ACACCTCCCA TAGCGACGTT GCTCAAGATT GCAAAAGGGC TCAAGGTCGG TATTCATTAC TTTTTTGAAG AAGAAGGTGA CCGGCAAAAA TTCGTCCTGA CCCGCGGCGG TAGCGGACCT GCAAGTAAGC GCAGGGCAGG AAGCGACATT GTCCAGGGAT ATCTTTACCG ACCGCTCGCC CCGGGCATCC GCCACAAGCA AATAGAGCCG TTTCTCGTGG CGTTCGAAGA AACCGCATGG GACGACAGCC GTTTTTACAG CCATGAAGGG GTCGAGTTCA TATATCTGCT CGAAGGTGAA CTGGAATTTC ACTACGGTCA GGAAATTATG ACCCTGCAAC CGGGCGATAG CATCTATTAC GACTCTTCGG AGCCCCATGG ATATGTCTCC ATCGGCTCAC AGCAGGCCAA AGCGGTCGCA GTGCTCTACT CCAAGGATTA A
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Protein sequence | MKEIKPEIRE LKLGEKARKL RQERRLTLQE LAELTGLSKP LLSQIENDQV TPPIATLLKI AKGLKVGIHY FFEEEGDRQK FVLTRGGSGP ASKRRAGSDI VQGYLYRPLA PGIRHKQIEP FLVAFEETAW DDSRFYSHEG VEFIYLLEGE LEFHYGQEIM TLQPGDSIYY DSSEPHGYVS IGSQQAKAVA VLYSKD
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