Gene Gura_0875 details

Gene Information

• Locus tag: Gura_0875
• ID: 5163167
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter uraniireducens Rf4
• Kingdom: Bacteria
• Replicon accession: NC_009483
• Strand: -
• Start bp: 1038130
• End bp: 1040016
• Gene Length: 1887 bp
• Protein Length: 628 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 640548371
• Product: multi-sensor signal transduction histidine kinase
• Protein accession: YP_001229654
• Protein GI: 148262948
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase)
• TIGRFAM ID: [TIGR00229] PAS domain S-box

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGACAAT CCGACAAAAA ATACCCCCTA AATCCTACTC TGTTCAACAA TTACGAAAGT 
CTCCTGTTGG GGATTGCGTT TCTGTTCGGC CTGTATCTGG CAAGCTTGCA CAGCTACCTC 
CGGTTCCATA CCCTTGTTGA AATTTTCTCC GTTGTAGGCG CCTGCAGCAT ATTCATGATC 
GCCTGGAACA CTCGGCGTTT CCTGAACAAC AACTACCTTC TGTTCATCGG CATCGCATAT 
CTCTTTGTTG CGACAATCGA TCTCCTCCAT GCCCTGTCTT ACAAGAACAT GGGGGTATTC 
CAGACTACCA GCGTCAACCT GGCAACCCAG TTCAGGATTG CGGCCCGTTA CCTGCAAAGC 
ATTTCCCTGT TGCTCGCACC GCTGTTCCTC AATCGCCGGC TCAAACCGGG TTTACTGGCT 
TCCTGCTATG CCGCTGTCGT CGCACTGATC CTTGCCTCCA TTTTTACCGG GCAGATTTTT 
CCCACCTGTT TTATAGAGGG AATTGGACCG ACCCCTTTCT ATAAAGCCAG TGAATACATG 
ATTTCGCTTC TGTTTCTCAC CGCCCTGGTC GTCCTCCTGC GAAAACGCCG GGCGTTCGAC 
CGGCATGTCA CTTTACTGCT CACCACGTCG ATTATTCTGT TCATCATTGC TGAACTGGCC 
TTCGCACTGT ATGCGGATGA CTACGGCACG GGCAACCTTG CAGGACATCT TTTCAGGTTA 
ATCGGCTTCT ATCTCATTTA CAGGGCCATG ATCGCGACCG GACTGGCCAG CCCCTATGAC 
ATTCTGTTCA GAGAACTGAA ACAGAGCGAA GAAAAATTCT CCAAAGCATT CCACACTTCG 
CCGATGGTGT TGACTATCTC CAGACTGGAA GACGGCAGAT ATGTCGAAGT CAATGAAGCC 
TTCGAGCGGC TCCTGCAACA TCGGCGTGAG GACGTTACCG GCCGCACATC GATCGAACTC 
GACATCTGGG CAAACCCGGC TGACCGCGAG AAAATGATTC AAATGCTCAA GGAGCATGGC 
GAAGTCCGCA ATCTTGAACT CAACTTCAAA GACAAAGAAG GAAAGGCGAT TTGGGGGTTA 
TATTCGGCAA CGACCATCGA AATAAACGGG GAACAGTTGC TGCTCAGCAT GGTTAACGAC 
ATGACCGAAC GGAAACGGAC TGCCGAAGAA ATCGAAATAC TGAATACGAA CCTGACAAGC 
CGCGCATTCG AGCTCGAACT TGCCAACCAG GAACTGGAAA CGTTCAGTTA CACTGTTTCC 
CACGACCTCC GCGCCCCATT GACCAACATC AGCAGTTACA GCCAGATACT CCAGACATAT 
TGCGGTGAGA ATCTCGATGA TCAATGCAGG GGGTACATAC GAAACATTTT TGAAGAAACC 
GAACGGATGG ATCAGCTTAT CAGCACTCTT CTGAACTTCT CCCGGCTGTC GCGAAACGAG 
ATCACCAGGG AACCGATTGA CCTTAGTATC ATTGCAGAGG TCATAACAGC GGAACTCAGG 
TTAAATGAGC CTGAGCGGCA AGTGAAATGC ATCATCGCCA AAGGGGTGAC GGCCGTAGGG 
GATCGGAAGC TGATTCAGGT CGTCCTGGAA AATCTTCTCG GCAATGCCTG GAAGTACACC 
GGGAAAAGGG AAAACGCCGT GATCGAGTTC GGTGTGAAAA AGTCCGGTGG TAATCCCGTC 
TACTTCGTTC GCGACAACGG GGCCGGATTT GATATGGTCT ACGCCGAAAA GATGTTTACT 
CCCTTCTGCC GCCTCCCCGG TACGACCGAA TTCAAAGGGC ACGGCATCGG CCTCGCCACG 
GTGCAGCGAA TCATTCAACG CCATGGAGGA CGGGTCTGGG CCGAGGGGGT GGTCGGGGAA 
GGAGCGACCA TCTATTTTAG TCTGTAA 

 

Protein sequence

MGQSDKKYPL NPTLFNNYES LLLGIAFLFG LYLASLHSYL RFHTLVEIFS VVGACSIFMI 
AWNTRRFLNN NYLLFIGIAY LFVATIDLLH ALSYKNMGVF QTTSVNLATQ FRIAARYLQS 
ISLLLAPLFL NRRLKPGLLA SCYAAVVALI LASIFTGQIF PTCFIEGIGP TPFYKASEYM 
ISLLFLTALV VLLRKRRAFD RHVTLLLTTS IILFIIAELA FALYADDYGT GNLAGHLFRL 
IGFYLIYRAM IATGLASPYD ILFRELKQSE EKFSKAFHTS PMVLTISRLE DGRYVEVNEA 
FERLLQHRRE DVTGRTSIEL DIWANPADRE KMIQMLKEHG EVRNLELNFK DKEGKAIWGL 
YSATTIEING EQLLLSMVND MTERKRTAEE IEILNTNLTS RAFELELANQ ELETFSYTVS 
HDLRAPLTNI SSYSQILQTY CGENLDDQCR GYIRNIFEET ERMDQLISTL LNFSRLSRNE 
ITREPIDLSI IAEVITAELR LNEPERQVKC IIAKGVTAVG DRKLIQVVLE NLLGNAWKYT 
GKRENAVIEF GVKKSGGNPV YFVRDNGAGF DMVYAEKMFT PFCRLPGTTE FKGHGIGLAT 
VQRIIQRHGG RVWAEGVVGE GATIYFSL