| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_0665 |
|---|
| Symbol | |
|---|
| ID | 5166555 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter uraniireducens Rf4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009483 |
|---|
| Strand | + |
|---|
| Start bp | 795032 |
|---|
| End bp | 796486 |
|---|
| Gene Length | 1455 bp |
|---|
| Protein Length | 484 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640548167 |
|---|
| Product | nitrite reductase (cytochrome; ammonia-forming) |
|---|
| Protein accession | YP_001229450 |
|---|
| Protein GI | 148262744 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3303] Formate-dependent nitrite reductase, periplasmic cytochrome c552 subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00225794 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAATGA AATTCGTGAA AATCCTCGCT TTGCCGGTAC TCCTGATTGC CATCGCCCTC
TGGTTCGGTT GCGCGCCGAA AAAGGTGGAG CGGGTGAAGA CGGCAGAAAT CGCCGATGGG
ACTGTCGATC CGGCCCAGTG GGGGAAGGTG TATCCTGTCG AATATGATCT CTGGAAAAAA
ACCGGTGAGC CGACCCCGGC AGGCAAAAGC AGGTACAAAC GCGGCTACGA TGAGGGTGAG
GCCCGTCCGG ACAAGCTCGA CGAGTTCCCC TTTTTGGCGC TTCTCTATAA CGGCTGGGCA
TTCGGCACAG AATACAAGGA GCCGCGGGGG CATTTCTTTA TGGTGCAGGA CCAGCTGGAG
GTGGATCCGG GGCGAATAAA GGCGGGAGGT TCTTGCCTCA CTTGCAAGAC CCCATACGCA
CCGGTTCTCC AGAAGCAGAT GGGACGGGAC TACTTCGCCA AGCCCTATAC CGAGGTGCAT
GAGAAGATTC CCGATGAGCA CCAGACCCTT GGCGTATCCT GCATTGACTG CCATAACAAC
AGGGACATGT CGCTCAAAAT CTCTCGAGGC TTTACCCTCG GCAAGGCACT GGAGACGATC
GGCGTCGAAG AAAGGAAGCT GACCCAGCAG GACATGCGGA CCCTGGTCTG CGCCCAGTGT
CATGTCACGT ACAGCATAAC CAAAGATGCC CAAATGAAGT CGACGGACGT CTTCTTCCCC
TGGGAGGGAG GCACGATGGG TAACATCACC ATTGAAAACA TCATAAAGAA GCTGCGAAGC
AACCCGCCGA GCAGGGAGTG GACCCAGAGC GTCACAGGCT TCCGACTGGC CTTCATCCGG
CATCCGGAGT TCGAGCTCTT CTCCAACAAT AGCGTCCACT GGAATGCCGG GGTCGCCTGT
TCCGACTGTC ACATGCCCTA CACCAAGGTG GGGAGCCAGA AGGTGTCGGA CCACCGGGTC
ATGAGCCCGC TCAAGAATGA TCTGAAGGCA TGCCAGCAGT GCCATGCCGA GAGCCCGGAA
TGGCTGCGCA ACCAGGTCTT CGCCATCCAG GACCGGACCA TGTCTCTCTT TATCCGATCC
GGTTATGCCA CAGCCACGGT GGCCAAGCTC TTCGAAATGG CGAACAGAGC CGAGACCGGT
GGAAAACGGA TCGACAGGAC GCTCTATGAC CAGGCGAAGA ACCATTACGA GGAAGCCTTC
TACAGGGTGA TCTACATCGG CGCCGAGAAC TCGGTCGGCT TCCACAACCC GACCGAGGCA
ATGCGCATCC TGGGCGATGC GGCCAGCCAG GCGGGAAAGG CGGAAGGACT TCTGCGCCAG
GCCCTTGCCA AGGCCGGGAT AGCAGTGCCG GTGAAGGTCG ACCTGGAGCT GGCGAAGTAT
GTCAACAACC GGGGAGCGAA GAAGCTCATG TTCAAACCCG AGCACGAAAT CAAGGACCCT
CTGGCAACCA GGTAG
|
|---|
| Protein sequence | MQMKFVKILA LPVLLIAIAL WFGCAPKKVE RVKTAEIADG TVDPAQWGKV YPVEYDLWKK
TGEPTPAGKS RYKRGYDEGE ARPDKLDEFP FLALLYNGWA FGTEYKEPRG HFFMVQDQLE
VDPGRIKAGG SCLTCKTPYA PVLQKQMGRD YFAKPYTEVH EKIPDEHQTL GVSCIDCHNN
RDMSLKISRG FTLGKALETI GVEERKLTQQ DMRTLVCAQC HVTYSITKDA QMKSTDVFFP
WEGGTMGNIT IENIIKKLRS NPPSREWTQS VTGFRLAFIR HPEFELFSNN SVHWNAGVAC
SDCHMPYTKV GSQKVSDHRV MSPLKNDLKA CQQCHAESPE WLRNQVFAIQ DRTMSLFIRS
GYATATVAKL FEMANRAETG GKRIDRTLYD QAKNHYEEAF YRVIYIGAEN SVGFHNPTEA
MRILGDAASQ AGKAEGLLRQ ALAKAGIAVP VKVDLELAKY VNNRGAKKLM FKPEHEIKDP
LATR
|
|---|
| |