| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_0648 |
|---|
| Symbol | |
|---|
| ID | 5166346 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter uraniireducens Rf4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009483 |
|---|
| Strand | + |
|---|
| Start bp | 772720 |
|---|
| End bp | 774099 |
|---|
| Gene Length | 1380 bp |
|---|
| Protein Length | 459 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640548148 |
|---|
| Product | FAD linked oxidase domain-containing protein |
|---|
| Protein accession | YP_001229433 |
|---|
| Protein GI | 148262727 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
|---|
| TIGRFAM ID | [TIGR00387] glycolate oxidase, subunit GlcD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGAAC CACGTATCAT CGAAAAATTG AAACAGATCA TCGGCGCCGA CAATACCGCC
ACGGAACGGC AGGACCTCCT CTGCTACGGC TACGATGCCA CGCAGATGGA GTTTCTCCCC
GATGTGGTGG TCCATCCGGC CAATGCAGAC GAGGTCTCGC AGGTGCTGAA GCTGGCCAAT
GCCGAGAAGA TACCCGTTTT CCCCCGCGGC GCGGGGAGCG GTTTCTCTGG TGGGGCACTC
CCCAAAGGGG GGGGCATCGT CCTCGTCACT ACCCGGATGA ACCGGATCAT TCGCATCGAC
ACCGACAACC TGGTGGCCGA GGTGGAGCCG GGGGTGGTAA CCGAACAGTT TCAGGAGGCG
GTGGAAAAAC TCGGGCTCTT CTATCCCCCC GATCCGGCCT CTCTCAAGTT TTCCACTCTC
GGCGGCAACG TGGCCGAGTG CGCCGGCGGT CCGCGGGCGG TCAAGTACGG CGTGACCAAG
GACTTCGTCA TGGGGCTGGA GCTGGTTCTT CCCACCGGAG AGATCATCCG CACCGGCGGC
GAAACGGTGA AGGGGGTGGT CGGTTACGAC TTGACCAAGC TTGTCTGCGG TTCCGAGGGG
ACCCTGGGGG TGATTACCAG GATCATCTTC AAGCTTCTCC CCTATCCCGA TGCAAAAAAG
ACCATGCTTG CCGTCTTCGA CTCCATCGAC GGGGCAGCTA CCGCTGTTTC CACCATCATC
AAAGGGAAGA TCATCCCGAC TACCCTCGAG TTCATGGACC ACGCCACCAT CCAGTGTGTC
GACCGGCGCT TCAACCTGGG TCTGCCGGCG GAAGGGAGAG CGCTCCTCAT CATCGAGGTG
GACGGGGACA GGGACCTGAT CGAGAAGCAG GCCGGGCAGA TCCACGACCT GATCAAGCCG
CTGGGGCTTG TCCAGTTCCG GGTGGCCAGG GACGCCGCCG AGTCGGAGCA GCTCTGGAAG
GTGCGGCGTC TCGTGTCGCC ATCGCTCAGG GATGTGAACC CGACCAAGTA CAACGAGGAC
ATCGTCGTGC CACGGAGCAA GGTCCCCGAT GTCATCCGCC GTATCGAGAA GATCCAGCAG
CGGTACGACA TTCCCATTGT CAATTTCGGC CATGCCGGTG ACGGCAACAT CCATGTCAAC
GTCATGATCG ATAAGGAAAT CCCGGGAATG GAGGAGAAGG CCCACGAGGC GATCAAGGAG
ATATTTCAGG CCGCCCTCGA CCTGGGGGGC ACCATGTCGG GAGAGCACGG CGTGGGTCTC
TCCAAGGCGC CGTATATTCC ATTGGAGCTT TCCCCTGTGC AGATCGCGAC GATGAAGGCG
ATAAAGGGGG CCTTGGACCC GAACAATATA CTGAATCCTG GGAAGATGTT CCCTGAATAA
|
|---|
| Protein sequence | MLEPRIIEKL KQIIGADNTA TERQDLLCYG YDATQMEFLP DVVVHPANAD EVSQVLKLAN
AEKIPVFPRG AGSGFSGGAL PKGGGIVLVT TRMNRIIRID TDNLVAEVEP GVVTEQFQEA
VEKLGLFYPP DPASLKFSTL GGNVAECAGG PRAVKYGVTK DFVMGLELVL PTGEIIRTGG
ETVKGVVGYD LTKLVCGSEG TLGVITRIIF KLLPYPDAKK TMLAVFDSID GAATAVSTII
KGKIIPTTLE FMDHATIQCV DRRFNLGLPA EGRALLIIEV DGDRDLIEKQ AGQIHDLIKP
LGLVQFRVAR DAAESEQLWK VRRLVSPSLR DVNPTKYNED IVVPRSKVPD VIRRIEKIQQ
RYDIPIVNFG HAGDGNIHVN VMIDKEIPGM EEKAHEAIKE IFQAALDLGG TMSGEHGVGL
SKAPYIPLEL SPVQIATMKA IKGALDPNNI LNPGKMFPE
|
|---|
| |