Gene Gura_0579 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGura_0579 
Symbol 
ID5164260 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter uraniireducens Rf4 
KingdomBacteria 
Replicon accessionNC_009483 
Strand
Start bp694745 
End bp698002 
Gene Length3258 bp 
Protein Length1085 aa 
Translation table11 
GC content63% 
IMG OID640548079 
Productexodeoxyribonuclease V, beta subunit 
Protein accessionYP_001229364 
Protein GI148262658 
COG category[L] Replication, recombination and repair 
COG ID[COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) 
TIGRFAM ID[TIGR00609] exodeoxyribonuclease V, beta subunit 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCAGT TCGACCTCCT CCATACCCCG CTTGCCGGGC GCAATCTCAT CGAGGCGAGC 
GCCGGCACCG GCAAGACCTT TACCATTGCC GGCATCTACC TGCGCCTTGT CCTGGAACGG
CAGCTTGCGG TGGGGGATAT CCTCGTCGTG ACCTTTACCG AGGCGGCGAC CAAGGAACTG
CGCGAACGGA TCAGGGAGCG GTTGCGTGAA GCGGAGAACG CCTTTGCCAT TGGTACGAGC
AGCGACCGGC TTCTTGCCGG ACTTTTGGAA AGCGCCATTG ACCGCGCCGC GGCCCGGAGG
CTGTTGACCA CGGCGCTCCG CTCCTTCGAC GAAGCGTCGA TCTTTACCAT TCACGGCTTC
TGCCAGCGGA TGCTCCAGGA AAACCCCTTC GAGAGCGGCT CGCTCTACGA TACCGAGCTG
GTGACGGACC AGCAGGGTCT TCTCAGGGAG ATTGCCGCGG ATTACTGGCG GATCAACTGC
TACGATGCGC CGGGTGCGGC AGTACAGACA GCGCTGGCTG CCGGCCTCGG ACCGGCTGCG
CTGCTGAAGA TTGCCGGCCG CCGGGCCGGC TCACCGTTCG TCACCGTCAT TCCGCAGGCG
ACGTTTCCCT TGCTCCCCAG GGAAGGGGAG ATCGATCCGG CACTGCTTGA AGCCTGGCTC
CTCGCCCTGA AACGGGGGTT CTTCGACTAC CTGGCCGCAG AACTTCCCAA GCGGAAGCGG
CGAGCCAACG TCCGTTTCTT CGAGGACCTC CTCCTCGATC TCCATTCTGC TCTGGAAAGG
AACGGCTCCC CTCTCCCCCG GCTCATCCGG GAGCGTTACC GGGCGGCGCT CATCGACGAG
TTCCAGGACA CGGATCCGGT CCAGTTCAGG ATCTTCGACG CCGTCTACCC GGCGGGGGAC
GAGACCCCCT TTTTCCTTAT CGGCGACCCC AAGCAGGCCA TTTACAGCTT CCGCGGCGCG
GATATCTTCG CCTACCTGGA GGCGGCCGCG GACACGGAAC AGCGCCATAC CCTCGGGGAA
AACTGGCGCT CAGAGCCGGC ATTAATCCAG GCGGTCAACG GGCTGTTCGA ATCACGTGTT
GAGCCCTTTT ACTTCGATGA CATCCACTTC AGCCGTGTAA CCCCGGCCGA GCGGGAGATC
GATCTCCTCA CCATGGACGG AAAACCGGAC CCAGCCCCCT TCCGGCTCTG GTTCGTCAAC
CGCAGGGAGG CGGGGAAACC GATCAACAAG GGTGATGCCT GGGAAATGCT CCCCGCTGCT
GTTGCAGGAG AAATCGCCCG GCTTTTGCAG GACGGGTCGG ACGGGCGGCT CCTGATCGGC
GAACGGCCGG TCGCTCCCGG CGATATTGCA GTCCTTGTCC GGGCCCATCG ACAGGCGCGG
CTCGTCCAGC AGGCGTTGCG GCAGCGGGGT ATTCCCAGCG TGCTTTGCAG CGCCGGCAAC
CTCTTCGAGT CAGATGAAGC TGAGGAAATC CTCCGTTTCC TCAAAGCCGT CGCCGAACCC
ACCAACGAAA GGCTTCTCAA GGCCGCACTG GTCACCGACA TGGTCGGCGT TTCCGGTGAT
GTTCTGGCCG GCCTCCTTGC CGACGAAAAC AGCTGGGAGA CGGTTTTGGC GGAGTTCCGC
CTTTACCATG AGATCTGGAC CGGCAACGGC TGCATGGCAA TGGCAATGCG CTTTCTGGCG
GTCCGCCGGG TACGGAGCCG CCTGCTCCCT CTCCCTGCCG GCGAAAGACG GCTGACCAAC
ATCCTGCACT GCTTCGAGAC CATCCATGAG GCAGCCGGCG AACAGAACCT GGGGCTGGAA
GGGGTCATCG CCTGGCTCGC CGAGCGGATC GCCGAAGAGC CGAAACGGGA AGAGCATGAA
ATCCGCCTGG AGACCGACGC CCAGGCAGTG CAGCTGGTGA CCATCCACAA GAGCAAGGGG
CTGGAATACC CCGTCGTCTT CTGTCCTTTC TGCTGGGCCG AATTCGGCGG TAAAGAGAAG
ACTGCCCTCT TTCACGATGA GCAGCGCACG ACGGTTGTGG ACATCGGCTC CCCCGACCTG
GACGCCCACC GGCGACAGGC GGCACAAGAG GGGCTGGCGG AAAGCCTCCG TCTGCTCTAT
GTGGCCCTCA CCCGGGCCCG GCACCGCTGC TACCTGGCAT GGGGTGCGTT CAAGGATGCC
GGTGATTCGG CCATGCACTA CCTCCTCCAT CCAGAGGCTT TGGCGGTCAA GGGGCAGGTG
GCGCTCAGCG ACGAAGCGAT GCTGGATGAT CTCCGCCGCC TGGCCGAGGC CGCCGAAAGC
AGCATAGCAG TGCTTCCCCT GCCCGAAGCG GACGGAATTT CTTATACCCC CCCTGCGGTA
GAGCCCGATG TATTCACCTG CCGGGCCTTC AGCGGCGCCA TCGACCAGGA GTGGCGGGTA
ACCAGCTTCA CCGCCTTTAC CACGACGGCC GGCCATCGCC CCCACATCCA GGAATTTCCC
GACCGGGACG AAACAACGCT CGAAGCGGAT ACGGGGCGCC TGCCGGCGGA ACCGCCACCA
TCAGGCATTT TTGCCTTCCC GAAAGGGGCT GCAGCCGGAA TCTTTTTCCA CGAGATCTTC
GAATCGCTCG ATTTCACCGC GGCGGCGGAG ACAGCGTCTC CCCTCATCGC CGAGCTCCTG
AAAAAGCACA GCTTCCCTTC GGATTGGCGG GAAACGGTCT GCTCCATGGT GAACAACGTG
CTACAGACCC CGTTAATCCA GGGAAAAGGC GTGTTTACCC TGGCCGACGT ACCACTCGGC
CACCGGCTCA CGGAGCTGGA ATTCTTCTTC CCCCTCGCCT TCATCAGCTC CGAGCGGTTG
AAGAACGTCG CGACGCGCTG GAACGGCATG GACCTGCCGC TGGACATGTC CGAGCTTTTC
AGCCGGCTAT CCTTCATGCC GGTCAAGGGG ATGGTGCGCG GGTTCATGGA CATGGTCTTC
GAACAGGGGG GGCGCTACTA CATCGTCGAC TGGAAATCGA ACCACCTGGG GAACCGGATC
GAGGAGTACG GCCAGGCACA GCTCCAGCGG GAAATGGAAA GGAACCTCTA TCCGCTCCAG
TACCTGCTCT ACACCGTCGC ATTCAACCGC TACCTTCAGC TGCGGGTGGA TGGGTACGAC
TACGACCGCC ACTTCGGCGG GGTCTACTAC ATCTTCCTGC GCGGGGTCGA TGCGGGGCGC
GGGTCGGGGT CCGGCACTTT CTTCGATCGT CCGCCGCGCA GAGTCATCGA GGATTTGACG
GAGGCACTGA TTCAGTAG
 
Protein sequence
MNQFDLLHTP LAGRNLIEAS AGTGKTFTIA GIYLRLVLER QLAVGDILVV TFTEAATKEL 
RERIRERLRE AENAFAIGTS SDRLLAGLLE SAIDRAAARR LLTTALRSFD EASIFTIHGF
CQRMLQENPF ESGSLYDTEL VTDQQGLLRE IAADYWRINC YDAPGAAVQT ALAAGLGPAA
LLKIAGRRAG SPFVTVIPQA TFPLLPREGE IDPALLEAWL LALKRGFFDY LAAELPKRKR
RANVRFFEDL LLDLHSALER NGSPLPRLIR ERYRAALIDE FQDTDPVQFR IFDAVYPAGD
ETPFFLIGDP KQAIYSFRGA DIFAYLEAAA DTEQRHTLGE NWRSEPALIQ AVNGLFESRV
EPFYFDDIHF SRVTPAEREI DLLTMDGKPD PAPFRLWFVN RREAGKPINK GDAWEMLPAA
VAGEIARLLQ DGSDGRLLIG ERPVAPGDIA VLVRAHRQAR LVQQALRQRG IPSVLCSAGN
LFESDEAEEI LRFLKAVAEP TNERLLKAAL VTDMVGVSGD VLAGLLADEN SWETVLAEFR
LYHEIWTGNG CMAMAMRFLA VRRVRSRLLP LPAGERRLTN ILHCFETIHE AAGEQNLGLE
GVIAWLAERI AEEPKREEHE IRLETDAQAV QLVTIHKSKG LEYPVVFCPF CWAEFGGKEK
TALFHDEQRT TVVDIGSPDL DAHRRQAAQE GLAESLRLLY VALTRARHRC YLAWGAFKDA
GDSAMHYLLH PEALAVKGQV ALSDEAMLDD LRRLAEAAES SIAVLPLPEA DGISYTPPAV
EPDVFTCRAF SGAIDQEWRV TSFTAFTTTA GHRPHIQEFP DRDETTLEAD TGRLPAEPPP
SGIFAFPKGA AAGIFFHEIF ESLDFTAAAE TASPLIAELL KKHSFPSDWR ETVCSMVNNV
LQTPLIQGKG VFTLADVPLG HRLTELEFFF PLAFISSERL KNVATRWNGM DLPLDMSELF
SRLSFMPVKG MVRGFMDMVF EQGGRYYIVD WKSNHLGNRI EEYGQAQLQR EMERNLYPLQ
YLLYTVAFNR YLQLRVDGYD YDRHFGGVYY IFLRGVDAGR GSGSGTFFDR PPRRVIEDLT
EALIQ