Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gura_0579 |
Symbol | |
ID | 5164260 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter uraniireducens Rf4 |
Kingdom | Bacteria |
Replicon accession | NC_009483 |
Strand | - |
Start bp | 694745 |
End bp | 698002 |
Gene Length | 3258 bp |
Protein Length | 1085 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640548079 |
Product | exodeoxyribonuclease V, beta subunit |
Protein accession | YP_001229364 |
Protein GI | 148262658 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
TIGRFAM ID | [TIGR00609] exodeoxyribonuclease V, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCAGT TCGACCTCCT CCATACCCCG CTTGCCGGGC GCAATCTCAT CGAGGCGAGC GCCGGCACCG GCAAGACCTT TACCATTGCC GGCATCTACC TGCGCCTTGT CCTGGAACGG CAGCTTGCGG TGGGGGATAT CCTCGTCGTG ACCTTTACCG AGGCGGCGAC CAAGGAACTG CGCGAACGGA TCAGGGAGCG GTTGCGTGAA GCGGAGAACG CCTTTGCCAT TGGTACGAGC AGCGACCGGC TTCTTGCCGG ACTTTTGGAA AGCGCCATTG ACCGCGCCGC GGCCCGGAGG CTGTTGACCA CGGCGCTCCG CTCCTTCGAC GAAGCGTCGA TCTTTACCAT TCACGGCTTC TGCCAGCGGA TGCTCCAGGA AAACCCCTTC GAGAGCGGCT CGCTCTACGA TACCGAGCTG GTGACGGACC AGCAGGGTCT TCTCAGGGAG ATTGCCGCGG ATTACTGGCG GATCAACTGC TACGATGCGC CGGGTGCGGC AGTACAGACA GCGCTGGCTG CCGGCCTCGG ACCGGCTGCG CTGCTGAAGA TTGCCGGCCG CCGGGCCGGC TCACCGTTCG TCACCGTCAT TCCGCAGGCG ACGTTTCCCT TGCTCCCCAG GGAAGGGGAG ATCGATCCGG CACTGCTTGA AGCCTGGCTC CTCGCCCTGA AACGGGGGTT CTTCGACTAC CTGGCCGCAG AACTTCCCAA GCGGAAGCGG CGAGCCAACG TCCGTTTCTT CGAGGACCTC CTCCTCGATC TCCATTCTGC TCTGGAAAGG AACGGCTCCC CTCTCCCCCG GCTCATCCGG GAGCGTTACC GGGCGGCGCT CATCGACGAG TTCCAGGACA CGGATCCGGT CCAGTTCAGG ATCTTCGACG CCGTCTACCC GGCGGGGGAC GAGACCCCCT TTTTCCTTAT CGGCGACCCC AAGCAGGCCA TTTACAGCTT CCGCGGCGCG GATATCTTCG CCTACCTGGA GGCGGCCGCG GACACGGAAC AGCGCCATAC CCTCGGGGAA AACTGGCGCT CAGAGCCGGC ATTAATCCAG GCGGTCAACG GGCTGTTCGA ATCACGTGTT GAGCCCTTTT ACTTCGATGA CATCCACTTC AGCCGTGTAA CCCCGGCCGA GCGGGAGATC GATCTCCTCA CCATGGACGG AAAACCGGAC CCAGCCCCCT TCCGGCTCTG GTTCGTCAAC CGCAGGGAGG CGGGGAAACC GATCAACAAG GGTGATGCCT GGGAAATGCT CCCCGCTGCT GTTGCAGGAG AAATCGCCCG GCTTTTGCAG GACGGGTCGG ACGGGCGGCT CCTGATCGGC GAACGGCCGG TCGCTCCCGG CGATATTGCA GTCCTTGTCC GGGCCCATCG ACAGGCGCGG CTCGTCCAGC AGGCGTTGCG GCAGCGGGGT ATTCCCAGCG TGCTTTGCAG CGCCGGCAAC CTCTTCGAGT CAGATGAAGC TGAGGAAATC CTCCGTTTCC TCAAAGCCGT CGCCGAACCC ACCAACGAAA GGCTTCTCAA GGCCGCACTG GTCACCGACA TGGTCGGCGT TTCCGGTGAT GTTCTGGCCG GCCTCCTTGC CGACGAAAAC AGCTGGGAGA CGGTTTTGGC GGAGTTCCGC CTTTACCATG AGATCTGGAC CGGCAACGGC TGCATGGCAA TGGCAATGCG CTTTCTGGCG GTCCGCCGGG TACGGAGCCG CCTGCTCCCT CTCCCTGCCG GCGAAAGACG GCTGACCAAC ATCCTGCACT GCTTCGAGAC CATCCATGAG GCAGCCGGCG AACAGAACCT GGGGCTGGAA GGGGTCATCG CCTGGCTCGC CGAGCGGATC GCCGAAGAGC CGAAACGGGA AGAGCATGAA ATCCGCCTGG AGACCGACGC CCAGGCAGTG CAGCTGGTGA CCATCCACAA GAGCAAGGGG CTGGAATACC CCGTCGTCTT CTGTCCTTTC TGCTGGGCCG AATTCGGCGG TAAAGAGAAG ACTGCCCTCT TTCACGATGA GCAGCGCACG ACGGTTGTGG ACATCGGCTC CCCCGACCTG GACGCCCACC GGCGACAGGC GGCACAAGAG GGGCTGGCGG AAAGCCTCCG TCTGCTCTAT GTGGCCCTCA CCCGGGCCCG GCACCGCTGC TACCTGGCAT GGGGTGCGTT CAAGGATGCC GGTGATTCGG CCATGCACTA CCTCCTCCAT CCAGAGGCTT TGGCGGTCAA GGGGCAGGTG GCGCTCAGCG ACGAAGCGAT GCTGGATGAT CTCCGCCGCC TGGCCGAGGC CGCCGAAAGC AGCATAGCAG TGCTTCCCCT GCCCGAAGCG GACGGAATTT CTTATACCCC CCCTGCGGTA GAGCCCGATG TATTCACCTG CCGGGCCTTC AGCGGCGCCA TCGACCAGGA GTGGCGGGTA ACCAGCTTCA CCGCCTTTAC CACGACGGCC GGCCATCGCC CCCACATCCA GGAATTTCCC GACCGGGACG AAACAACGCT CGAAGCGGAT ACGGGGCGCC TGCCGGCGGA ACCGCCACCA TCAGGCATTT TTGCCTTCCC GAAAGGGGCT GCAGCCGGAA TCTTTTTCCA CGAGATCTTC GAATCGCTCG ATTTCACCGC GGCGGCGGAG ACAGCGTCTC CCCTCATCGC CGAGCTCCTG AAAAAGCACA GCTTCCCTTC GGATTGGCGG GAAACGGTCT GCTCCATGGT GAACAACGTG CTACAGACCC CGTTAATCCA GGGAAAAGGC GTGTTTACCC TGGCCGACGT ACCACTCGGC CACCGGCTCA CGGAGCTGGA ATTCTTCTTC CCCCTCGCCT TCATCAGCTC CGAGCGGTTG AAGAACGTCG CGACGCGCTG GAACGGCATG GACCTGCCGC TGGACATGTC CGAGCTTTTC AGCCGGCTAT CCTTCATGCC GGTCAAGGGG ATGGTGCGCG GGTTCATGGA CATGGTCTTC GAACAGGGGG GGCGCTACTA CATCGTCGAC TGGAAATCGA ACCACCTGGG GAACCGGATC GAGGAGTACG GCCAGGCACA GCTCCAGCGG GAAATGGAAA GGAACCTCTA TCCGCTCCAG TACCTGCTCT ACACCGTCGC ATTCAACCGC TACCTTCAGC TGCGGGTGGA TGGGTACGAC TACGACCGCC ACTTCGGCGG GGTCTACTAC ATCTTCCTGC GCGGGGTCGA TGCGGGGCGC GGGTCGGGGT CCGGCACTTT CTTCGATCGT CCGCCGCGCA GAGTCATCGA GGATTTGACG GAGGCACTGA TTCAGTAG
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Protein sequence | MNQFDLLHTP LAGRNLIEAS AGTGKTFTIA GIYLRLVLER QLAVGDILVV TFTEAATKEL RERIRERLRE AENAFAIGTS SDRLLAGLLE SAIDRAAARR LLTTALRSFD EASIFTIHGF CQRMLQENPF ESGSLYDTEL VTDQQGLLRE IAADYWRINC YDAPGAAVQT ALAAGLGPAA LLKIAGRRAG SPFVTVIPQA TFPLLPREGE IDPALLEAWL LALKRGFFDY LAAELPKRKR RANVRFFEDL LLDLHSALER NGSPLPRLIR ERYRAALIDE FQDTDPVQFR IFDAVYPAGD ETPFFLIGDP KQAIYSFRGA DIFAYLEAAA DTEQRHTLGE NWRSEPALIQ AVNGLFESRV EPFYFDDIHF SRVTPAEREI DLLTMDGKPD PAPFRLWFVN RREAGKPINK GDAWEMLPAA VAGEIARLLQ DGSDGRLLIG ERPVAPGDIA VLVRAHRQAR LVQQALRQRG IPSVLCSAGN LFESDEAEEI LRFLKAVAEP TNERLLKAAL VTDMVGVSGD VLAGLLADEN SWETVLAEFR LYHEIWTGNG CMAMAMRFLA VRRVRSRLLP LPAGERRLTN ILHCFETIHE AAGEQNLGLE GVIAWLAERI AEEPKREEHE IRLETDAQAV QLVTIHKSKG LEYPVVFCPF CWAEFGGKEK TALFHDEQRT TVVDIGSPDL DAHRRQAAQE GLAESLRLLY VALTRARHRC YLAWGAFKDA GDSAMHYLLH PEALAVKGQV ALSDEAMLDD LRRLAEAAES SIAVLPLPEA DGISYTPPAV EPDVFTCRAF SGAIDQEWRV TSFTAFTTTA GHRPHIQEFP DRDETTLEAD TGRLPAEPPP SGIFAFPKGA AAGIFFHEIF ESLDFTAAAE TASPLIAELL KKHSFPSDWR ETVCSMVNNV LQTPLIQGKG VFTLADVPLG HRLTELEFFF PLAFISSERL KNVATRWNGM DLPLDMSELF SRLSFMPVKG MVRGFMDMVF EQGGRYYIVD WKSNHLGNRI EEYGQAQLQR EMERNLYPLQ YLLYTVAFNR YLQLRVDGYD YDRHFGGVYY IFLRGVDAGR GSGSGTFFDR PPRRVIEDLT EALIQ
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