| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_0423 |
|---|
| Symbol | |
|---|
| ID | 5166433 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter uraniireducens Rf4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009483 |
|---|
| Strand | + |
|---|
| Start bp | 494674 |
|---|
| End bp | 496206 |
|---|
| Gene Length | 1533 bp |
|---|
| Protein Length | 510 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640547927 |
|---|
| Product | PAS/PAC sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_001229212 |
|---|
| Protein GI | 148262506 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2202] FOG: PAS/PAC domain
[COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGAAA AAATCGACGA AATCAAGGCA CTGCTCGAAC AAAAGACCCA GGAGCTGCAG
GCCAGTGAGG CTCACTTCCG CGCCATCTTC AACCAGGCAG CGGCCGGCAT TGCGCTGGTG
GAGCTGGACG GCCGTTGGCT GCTGGTAAAT CAAAAATTTT GCGATATTGT CGGTTACCCT
GAAGCTGAGT TAAGGAATAT GAATTTTCAG GAGATCACCC ACCCCGATGA TCTCCCCGCA
GATCTTGAAA ACATCCGCCG GCTGCTGGCC GATGAGATAC AGCACTGTTT ATTCGAGAAA
CGTTACATCC GCAAGGATGG CTCCGTTGTC TGGGTAAATC TGAGCATATC CCTGGTACGC
ACGATTGATG ACGAGCCCCA CTATTTCATT GCCGTAGCGG AAGACGTTAC CGTCCGCAGG
AGGGTGGAGG AGGCGCTGCG TGAATCGGAG GAAAAGTTCT CCAGGGTCTT TCGCAACGCC
CCCATTGCGA TTACCATCAG CACTTTGGCT GAGGGGCGGT TCGTCGAGGT CAACGATACG
TTCGAACGGC TCAGCGGCTA CAGGCGCGAA GATATCATCG GCCGCACCTC GACAGAGTTA
GGTATCTGGA CTAATCCCGA TGATCGCGCC CGCATGCTTG AAGGGCTGCG TGGGCAAGGT
CCGGTCCGCG ACCTTGAAAT GTCCATGAGT GACAAAACAG GCAATGTTTT TGTGGGGTTA
TTGTCGGCGG TCATCATCGA ACTGAACGGA GAGGAGTATC TCCTCGTCCT GATGAAAGAC
GTCACCGCAC GCAAGCGGAT GGAGGAGGAG ATTGAGATAT TGAACACGAA CCTGGCATCA
CGAGCCGCTG ATCTTGAAGC CGCCAACAAG GAACTGGAGG CCTTCAGCTA CAGCGTTTCC
CACGATCTGC GCAAGCCCCT GACCAACATC AACGGATACT GCCAGTTGGT GCTGGAGCTG
TACGGCGACA GTCTCGATGA ACAGTGCAGA AGGTTCCTCC AGGAGATCTA CGACGGGACC
CTGCGCATGA ACCATCTCAT CGACACCCTG CTGAGATTTT CCCAACTGAC GCGCGGTGAA
CTGCGCCGGG AAGCGGTCGA TCTCAGCGAA ATAGCAAAGG AGGTTGCCGC GAAACTCAGC
TTGGAGGAGC CCGGGCGCCG GGTCAAATTC GATATTACAG AAGGGATAAC GGTGACTGGT
GACGCGAGAT TGTTGCGGGT GGTAATGGAA AACCTCCTGG GCAACGCATG GAAGTACAGC
GGCAAACAGG AAGAGGCGCT GATCGAATTC GGGGGCACGG AGGTCGCGGG GAAACCCGCC
TGTTTTGTCC GGGATAACGG CATCGGCTTC GATATGGGTG AGGCGGACAG GCTGTTCGAA
GCTTTTGGGC GCTTGTCCGG CGCGACCGAG TTTGCGGGTC ATGGCATCGG TCTGGCCACG
GTGCAGCGGA TCATCCACCG CCATGGCGGC CACATCTGGG CGGAGGGGGA AGAGGGAAAA
GGAGCGACGT TCTACTTCTC CCTGGAACGG TAA
|
|---|
| Protein sequence | MSEKIDEIKA LLEQKTQELQ ASEAHFRAIF NQAAAGIALV ELDGRWLLVN QKFCDIVGYP
EAELRNMNFQ EITHPDDLPA DLENIRRLLA DEIQHCLFEK RYIRKDGSVV WVNLSISLVR
TIDDEPHYFI AVAEDVTVRR RVEEALRESE EKFSRVFRNA PIAITISTLA EGRFVEVNDT
FERLSGYRRE DIIGRTSTEL GIWTNPDDRA RMLEGLRGQG PVRDLEMSMS DKTGNVFVGL
LSAVIIELNG EEYLLVLMKD VTARKRMEEE IEILNTNLAS RAADLEAANK ELEAFSYSVS
HDLRKPLTNI NGYCQLVLEL YGDSLDEQCR RFLQEIYDGT LRMNHLIDTL LRFSQLTRGE
LRREAVDLSE IAKEVAAKLS LEEPGRRVKF DITEGITVTG DARLLRVVME NLLGNAWKYS
GKQEEALIEF GGTEVAGKPA CFVRDNGIGF DMGEADRLFE AFGRLSGATE FAGHGIGLAT
VQRIIHRHGG HIWAEGEEGK GATFYFSLER
|
|---|
| |