| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_0374 |
|---|
| Symbol | |
|---|
| ID | 5166345 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter uraniireducens Rf4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009483 |
|---|
| Strand | + |
|---|
| Start bp | 438582 |
|---|
| End bp | 440846 |
|---|
| Gene Length | 2265 bp |
|---|
| Protein Length | 754 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640547878 |
|---|
| Product | primosomal protein N' |
|---|
| Protein accession | YP_001229163 |
|---|
| Protein GI | 148262457 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
|---|
| TIGRFAM ID | [TIGR00595] primosomal protein N' |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0607469 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTGAGT CCAACTCACC ATTAATCATC GATGTCGCGG TGCCGCTCCG GCTCTACACC
ACCTTCCACT ACGCAGTTCC CCCGGAGCTT GCTCCTCTGG CCACGACCGG CGTACGCGTG
CTCGTGCCGT TCGGGAGGCG CAAGCTTACC GGCTATGTCA TCGGTATTGT GGCGGAGAGC
GAAGAAGAGC TGAAGCCGAT CAGCGCCGTC CTCGACCCGG AACCGCTCTT CACATCGGAG
GAGCTGGAAT TTTTTCGCTG GAGCGCGTCC TACTACCTTC ATCCCCTGGG TGAAGTGATC
AAGACGGCTC TTCCTGCGGG GATCAATGTT GAGAGCCGCA AGCGCCAGGT CTGTTCTGCC
GACGGTATGG AGACCGAAGA AGAGGTTCTG ATCGGAGGTA AAGGGGTCAA GAGGGAGACC
TTTTACAGGG CGGTTCCTTC TCTGGAGCTG CCGGCAAATC TGCGCGGCAA AGGCTTGCGC
ATCGCAGAAT TTCTGCGAAC AATCAGCGAG GCTGCGGCGG GGCAGCTGCG CCGGGAGTTT
GGCGCCACTC CGGCGCATTT CCGGCGTCTG CTCGAACTCG GCCTGGTCGA GGCATCCGAA
CGAGAGGTGT ACCGCGACCC GTTCCGGGAA GAGGTGTTTG CCCACGACAC TCCTCTGGTC
TTGAATGATA GCCAGTCTGA GGCACTGGAG CGGATCATTG CGGCAACCGA TGGACGCGCC
TTCGCACCGT TTCTTCTCCA TGGCGTAACC GGCAGCGGCA AGACCGAGGT CTATCTGCAA
TCCATTGCCC ATGTCCTCGA TGCAGGAAAA ACGGCCCTGG TGCTGGTGCC GGAGATCGCA
CTCACCCCCC AGCTGGTCAA GCGATTCAAG AGCCGCTTTA CCTGCGGCAT TGCCGTTCTC
CACAGCGGAT TATCCGACGG CGAACGTTAC GACGAATGGC GGCGCATCCG GCGCAAAGAG
GTCTCCATCG TCATCGGCGC CCGTTCCGCC CTTTTTGCGC CGCTCTCTGC GATCGGCATT
ATCGTCGTCG ATGAAGAGCA CGAGGCATCG TACAAGCAGT CCGAGGGGTT CCGCTACAAT
GCCAGGGATC TGGCACTGGT GCGGGGAAAG ATGAGTAAGG CAGTGGTGAT CCTCGGTTCC
GCCACTCCGC TTTTGACCAC CTACCATGCG GCGCAGGAGG GGAAACTCGG TTACCTGCAC
CTTCCCCACA GGGTTCGCAA CCTCCCCATG CCGGCAACGG AACTGCTCGA TGCCCGCGGC
CACAAGGGCG ACACCTTTCT GCCGCAGCTG ACATCCGCCA TTGCCAAAAA TCTGGCGGCC
GGAGGGCAGA CGCTGCTCTT CCTCAATCGC CGCGGTTTTG CCACCTACCT CGTCTGTCAG
GATTGTGGCC ACGTGCTCCG CTGCCCCAAC TGCTCCGTCA CCCTTACCTA TCACCGCCGC
AGGGAGCGAC ACTTCTGCCA CTATTGCGAC TACTCCATCC CAGCCCCGTC GGTCTGCCCG
GAATGTGACA GCCAGGCCAT CGGCCTATTG GGGCGTGGCA CGGAGCGAGT CGAAGAGGAG
GTGCGGGAGC TTTTTCCTCT CGCCCGGGTC GGACGCATGG ACCGGGACAC GACGAGCGGC
CGTGGCGGGC ACGCAAGGGT GTTGAAAGGG TTGGAGGACG GCACTATCGA CATCCTTATC
GGCACCCAGA TGATCGCCAA GGGGCACGAT TTCCCCGGCG TCACTCTCGT CGGGGTAGTG
TCCGCCGATG CAACCCTCAA TATTCCCGAT TTTCGCAGCA GTGAGCGGAC CTTTCAACTG
ATCAGCCAGG TGATGGGGCG TGCCGGTCGT GGTGATGCGC CGGGAAAGGT GCTGATCCAA
AGCCTGGCGC CGGATCACTA TGCCATTACC CATGCCGTTG CCCATGATTT TGAAGGTTTT
TATGCCGAAG AAATCAGTTT CCGCAGAGAG GTCGGTTACC CGCCGTTTAC ACATCTGGCA
GCGCTGACCC TGTCGGGCAA TTCCGTTGCA GAGGTGGAAA AAGGAGCGGA AGCAGTCGCC
GGAGTGCTGC ATAGTACAAA ACGGGAACTG AAAAGCAGGG TTGAGATTCT CGGGCCGGTA
TCTGCTCCAC TTGGCAAGAT CCGCGGCCGT TACCGCTGGC AGATTCTTCT GAAATCAACA
GGTCGTGCAG AGCTGCACCG ATTACTGGCT CGATTCAAGG CCGGCGTCAA GTTACCGGCG
GTGGTGAGGA TGGCTGTCGA TGTAGACCCG GTGGATATGC TCTGA
|
|---|
| Protein sequence | MTESNSPLII DVAVPLRLYT TFHYAVPPEL APLATTGVRV LVPFGRRKLT GYVIGIVAES
EEELKPISAV LDPEPLFTSE ELEFFRWSAS YYLHPLGEVI KTALPAGINV ESRKRQVCSA
DGMETEEEVL IGGKGVKRET FYRAVPSLEL PANLRGKGLR IAEFLRTISE AAAGQLRREF
GATPAHFRRL LELGLVEASE REVYRDPFRE EVFAHDTPLV LNDSQSEALE RIIAATDGRA
FAPFLLHGVT GSGKTEVYLQ SIAHVLDAGK TALVLVPEIA LTPQLVKRFK SRFTCGIAVL
HSGLSDGERY DEWRRIRRKE VSIVIGARSA LFAPLSAIGI IVVDEEHEAS YKQSEGFRYN
ARDLALVRGK MSKAVVILGS ATPLLTTYHA AQEGKLGYLH LPHRVRNLPM PATELLDARG
HKGDTFLPQL TSAIAKNLAA GGQTLLFLNR RGFATYLVCQ DCGHVLRCPN CSVTLTYHRR
RERHFCHYCD YSIPAPSVCP ECDSQAIGLL GRGTERVEEE VRELFPLARV GRMDRDTTSG
RGGHARVLKG LEDGTIDILI GTQMIAKGHD FPGVTLVGVV SADATLNIPD FRSSERTFQL
ISQVMGRAGR GDAPGKVLIQ SLAPDHYAIT HAVAHDFEGF YAEEISFRRE VGYPPFTHLA
ALTLSGNSVA EVEKGAEAVA GVLHSTKREL KSRVEILGPV SAPLGKIRGR YRWQILLKST
GRAELHRLLA RFKAGVKLPA VVRMAVDVDP VDML
|
|---|
| |