| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_0340 |
|---|
| Symbol | |
|---|
| ID | 5163624 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter uraniireducens Rf4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009483 |
|---|
| Strand | - |
|---|
| Start bp | 402047 |
|---|
| End bp | 402637 |
|---|
| Gene Length | 591 bp |
|---|
| Protein Length | 196 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640547843 |
|---|
| Product | CMP/dCMP deaminase, zinc-binding |
|---|
| Protein accession | YP_001229129 |
|---|
| Protein GI | 148262423 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0590] Cytosine/adenosine deaminases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00000331543 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCATGC CCGTAGTAAG CATTCAGCTG CCCGATTGGG TAGAGCGATT TCTGGAACAA
TCACCCCGGA TATTCCCAGG AACAGACGAC CGAATGCGTT TTGTGATTGA GCTTTCCCGC
CAGAACGTGC GGCACGGAAC CGGGGGACCA TTCGGGGCCG CAGTCTTCGA CAGTGATGGG
CAGCTGATAG CTCCGGGGAT CAACATGGTT GTCATCTCGA ACTGCTCTCT CCTCCATGCG
GAGACAGTGG CGCTGGCATG TGCTCAAAAG GCACTGGGAC GCTATGATAT CGGCAACGGG
GGAAGGCTCC GATACGACCT CTTCGCCACT ACTGAACCGT GCGCCATGTG CTTTGGCGCC
ATTCCCTGGT CCGGGGTGCG CCGACTGGTT TGTGGAGCAC GAGACGCAGA CGCCCGTGCC
ATCGGTTTCG ACGAGGGGCC GAAACTTGCA GACTGGGTGG CGGCCCTCAA TGCCCGCGGC
ATCACCGTCC TGCGCGACGT ACTCCGCAAT GAGGCAGTAG CGGTGCTTCA AGAATATGCA
GCAGCAGGGG GCCTCGTTTA CAACACCGGG CATCAGGCGC TTACAACTTG A
|
|---|
| Protein sequence | MTMPVVSIQL PDWVERFLEQ SPRIFPGTDD RMRFVIELSR QNVRHGTGGP FGAAVFDSDG
QLIAPGINMV VISNCSLLHA ETVALACAQK ALGRYDIGNG GRLRYDLFAT TEPCAMCFGA
IPWSGVRRLV CGARDADARA IGFDEGPKLA DWVAALNARG ITVLRDVLRN EAVAVLQEYA
AAGGLVYNTG HQALTT
|
|---|
| |