| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_0339 |
|---|
| Symbol | |
|---|
| ID | 5163623 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter uraniireducens Rf4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009483 |
|---|
| Strand | - |
|---|
| Start bp | 400640 |
|---|
| End bp | 401731 |
|---|
| Gene Length | 1092 bp |
|---|
| Protein Length | 363 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640547842 |
|---|
| Product | glycine cleavage system T protein |
|---|
| Protein accession | YP_001229128 |
|---|
| Protein GI | 148262422 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase) |
|---|
| TIGRFAM ID | [TIGR00528] glycine cleavage system T protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.000293484 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAATCTC TCAAGAATAC GCCTCTTTTA TCACGGCACC AGCAAATGAA GGCACTACTT
GCACCGTTTG GCGGCTGGAA CATGCCGATC CAGTACGAAG GAATCATCGC CGAGCACAAA
TGGTGCCGGC AAAAGGCCAG CCTGTTCGAC ATCTGCCACA TGGGGGAATT CCTTTTCCAG
GGAGACATCG AGGCAAGCGG CCTCGAAAAC GTCTTCACAT TCTCCGTCAA ATCCATACCG
GTGGGGCGCT CCCGTTACGG CTTCCTCCTC AACGAAAACG GCGGCATCAT CGACGACCTG
ATCGTCTTCC GTCTCGCAGA GGACGCGGTG ATGATCGTCG TCAACGCAGC CACCATCGAC
AACGACTTTA GCGTGATTCA ATCGCGCCTC AAACCGGGTG GGGTCTTTTC CAACACGTCG
GCCGACACCG GCAAGCTGGA CATTCAGGGA CCGCTCTCCC GCGACGTGCT GGTACAGGCC
TTCGGCCCGG AAATCGGCAA AATCCCTTAC TTTAAATTCA TCAGGATGAA CATCCTCGGC
GTCGAGGCAA TTGTCAGCCG CACCGGCTAC ACCGGCGAGT TGGGCTACGA AATATTCCTG
CCGGCACAGA AGGTTGTCGA GCTGTGGGAC CTGCTCCTCG GCGACGAACG GGTAAAACCG
GCCGGGCTCG GCGCTCGGGA CGTGCTGCGA CTGGAGGTGG GGTACAGTCT TTACGGCAGC
GACATCGACG AAGTCACCAC GCCACTGGAA GCGGGCCTCG GCGCATTCGT CAACTTCGAC
AAGCAATTCG TCGGTCGCGA GGCTCTGCTG AAGCAGCAAC AGACTGGTCT GACAAAAGCC
AAGGCAGCGT TTCAGGTGAG TTCGCGCCGT GCACCGCGCC ACCATTACGA GATATGCTCC
GAGGGGGCAG CCGTCGGCAC GGTGACCAGC GGGGTCTTTT CGCCCATGCT CGGCTGCGGC
GTAGGTATCG GCTTCGTCAA ACCGGCAGTG GCGACTGTCG GCGCGCCCCT CACCATCAGG
CACGACAATG TCAGCATGGA GGCAACCGTT GTGGAACTCC CCTTCTACAA GGGCGGATCG
CTACGATCGT AG
|
|---|
| Protein sequence | MESLKNTPLL SRHQQMKALL APFGGWNMPI QYEGIIAEHK WCRQKASLFD ICHMGEFLFQ
GDIEASGLEN VFTFSVKSIP VGRSRYGFLL NENGGIIDDL IVFRLAEDAV MIVVNAATID
NDFSVIQSRL KPGGVFSNTS ADTGKLDIQG PLSRDVLVQA FGPEIGKIPY FKFIRMNILG
VEAIVSRTGY TGELGYEIFL PAQKVVELWD LLLGDERVKP AGLGARDVLR LEVGYSLYGS
DIDEVTTPLE AGLGAFVNFD KQFVGREALL KQQQTGLTKA KAAFQVSSRR APRHHYEICS
EGAAVGTVTS GVFSPMLGCG VGIGFVKPAV ATVGAPLTIR HDNVSMEATV VELPFYKGGS
LRS
|
|---|
| |