| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_0222 |
|---|
| Symbol | alaS |
|---|
| ID | 5164193 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter uraniireducens Rf4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009483 |
|---|
| Strand | + |
|---|
| Start bp | 285046 |
|---|
| End bp | 287676 |
|---|
| Gene Length | 2631 bp |
|---|
| Protein Length | 876 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640547721 |
|---|
| Product | alanyl-tRNA synthetase |
|---|
| Protein accession | YP_001229011 |
|---|
| Protein GI | 148262305 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0013] Alanyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAGGCA AAGAAATCAG GGCGCAATTT TTCAAATTTT TCGAGGAAAG AGGGCATACG
GTTGTTGAAA GTTCCAATCT CATCCCCAGG AATGACCCCA CCCTCCTCTT TACCAATGCG
GGGATGAACC AGTTCAAGGA TGTCTTCCTC GGCCTGGAAA AACGCGATTA CGTGCGTGCC
TGCAGTTCGC AGAAATGCGT GCGGGCCGGC GGCAAGCACA ACGACTTGGA GAATGTGGGG
CGCACAGCCC GCCACCATAC ATTTTTCGAA ATGCTCGGCA ACTTTTCCTT CGGCGATTAC
TTCAAGAAGG AAGCGATTGC CTTTGCCTGG GAGTTTCTGA CCAAGGAGCT GAAGCTGGAC
AAGGACCGCC TCTACGTGAC TGTCTATACG GACGATGATG AGGCGGCCGA TATCTGGAAC
AGGCAGGAAG GGGTGCCGCT GGAGCGGATC TACCGTTTCG GCGAGAAAGA CAATTTCTGG
TCCATGGGGG ATACCGGCCC CTGCGGCCCC TGCACGGAAA TTTTCTGGGA CAACGGCCCG
GGCACCGGCT GCGGCAGTCC GACCTGCGAG GTGGGGTGCG ACTGCGACCG CTACATGGAG
ATCTGGAACA ACGTCTTCAT GCAGTTCAAT CGGGATGCGC AGGGCAATCT GACGCCGCTC
CCCAAGCCCT CGGTCGATAC CGGCATGGGG CTGGAGCGGA TCTCGACGGT CATGCAGGGG
GTGACCTCCA ATTACGATAC CGACCTTTTG CAGGGGATCA TCAAGCACGT GGAAAAGCTT
TCCGGCAAGC GTTACCGTCA GGACGAACGG GACGATGTCT CCATGAGGGT AATCGCCGAT
CACTCCAGGG CTATCACCTT CCTCATCTGC GACGGCATCC TTCCCAGTAA CGAGGGGCGG
GGCTACGTGC TGCGCCGGAT CATGCGCCGG GCTGCACGCC ATGCCAAGAT GCTCGGCTTT
GCCGAGCCGG CCCTCTACCG GATCGTCGAT GCCGTCAATA CCATGATGGG GGATGCCTAT
CCTGAACTCC TTGAGCGGGA GGAGTACATA AAGAAGGTCA TCCATGCGGA GGAAGAACGG
TTCATCGAGA CGCTGGACAG GGGGCTTGCC ATCCTTAACG AAGAGGTGGC TGCGCTGAAG
AAAGAGGGCA AGAGCGTCGT TCCGGGCGAG GTGATTTTCA AGCTTTACGA CACCTACGGT
TTTCCGGTGG ACCTCACCGC CGACATCGTC GAAAACGAGG GATTCACCAT TGACGAGGAC
GGCTTCGCCC TCTGCATGGA AAGGCAGCGC CTCCAGGCGC GGGAGAACTG GAAGGGCTCC
GGTGAGGAGG GGCTGGCAGA GATTTACAAA ACCCTCCATG GCAGGGGGAT CAGAAGCGCG
TTCGTCGGCT ACAGTGAACA GACCGCTTAT TCCGCCATTA CCGCCATTCT CCGCGAAGGC
GCAGAGGTAG CGGAGGCAGT TGCGGGCGAA ATGGTGGAGG TCGTCGTCGA TACCACCCCC
TTTTACGGCG CGTCGGGCGG CCAGGCGGGC GACACGGGGG TCATCTCCAC CGGCAGTGCC
CATCTCCGGG TGGTAGCCAC CAGCAAGCCG TTCCCCGATC TGACCGTCCA CCGGGCGCTC
GTCACCGAAG GGACGGTCAA GGCTGGCGAT GCGGCCGATC TCCGGGTGGC CACGGAGGTC
CGGGGGGCCA CGGCCCGCAA CCACACCGCC ACCCATCTGT TGCAGTCCGC ACTCCGTCAG
GTGCTGGGTG AGCATGTGAA GCAGGCGGGG TCGCTGGTGA CGGCCGAGCG GCTCCGTTTC
GACTTCACCC ATTTCTCCGC CATGACGGTC GAGGAGCTGC GCCGGGTGGA AAACATCGTC
AACACCTATG TCATGGACAA TGCCGATGTG AAATCGCTGG AGATGGCCGC GACAGAAGCC
ATGCAGAGCG GCGCGACGGC GCTGTTCGGC GAGAAGTACG GCGACCGGGT AAGGGTGGTC
AAGGTCGGCG AGGTGAGCAG CGAGCTGTGC GGCGGGACCC ATGTGCGGGC CGCCGGGGAC
ATCGGTTTCT TCAAGATCGT CGGCGAGGCG GGGATCGCCG CCGGGGTGCG GCGCATAGAG
GCGCTGACCG GCAGCGGGGC CTTGGAATAC GTGCAGCAGC TGGAGGATGA GCAGCGGAGC
ATCGCCGTCC TGGTAAAGGC CGAAGGCGGG ACCGCCCTTG ACAAGGTCGA CCGGTTGTTG
GCGCGGCAGA AAGAGTTGCA GCGTGAAGTG GAGGCGCTCC AGGCACGATT GAACGCCTCG
CGCTCCGCAG ACCTCCTGGC GGGGGCCAGG GAGACGAACG GAATAAAGGT CCTTGCCGCC
AAGGTCGAGA TGGATGATCC GAAGGGTTTG CGTGAGCTGG CCGACAGCCT GAAGGACCGC
CTGCAATCCG GGGTGATCGT CATAGGTTGC GTCTCTGCCG GCAAGGCCAA CCTGCTGGTG
GCGGTGACGA AAGACCTCAG CGACCGCTTA AGAGCGGGGG ATATCATCAA GTCGCTGGCG
CCCATAATCG GCGGCAGCGG CGGCGGCAAG CCGGAACTGG CCCAGGCCGG CGGAACCAAG
CCGGAAAATC TGGACGAAGC GCTGGAAGCG GCGTATAAAA TCATCGGCTG A
|
|---|
| Protein sequence | MTGKEIRAQF FKFFEERGHT VVESSNLIPR NDPTLLFTNA GMNQFKDVFL GLEKRDYVRA
CSSQKCVRAG GKHNDLENVG RTARHHTFFE MLGNFSFGDY FKKEAIAFAW EFLTKELKLD
KDRLYVTVYT DDDEAADIWN RQEGVPLERI YRFGEKDNFW SMGDTGPCGP CTEIFWDNGP
GTGCGSPTCE VGCDCDRYME IWNNVFMQFN RDAQGNLTPL PKPSVDTGMG LERISTVMQG
VTSNYDTDLL QGIIKHVEKL SGKRYRQDER DDVSMRVIAD HSRAITFLIC DGILPSNEGR
GYVLRRIMRR AARHAKMLGF AEPALYRIVD AVNTMMGDAY PELLEREEYI KKVIHAEEER
FIETLDRGLA ILNEEVAALK KEGKSVVPGE VIFKLYDTYG FPVDLTADIV ENEGFTIDED
GFALCMERQR LQARENWKGS GEEGLAEIYK TLHGRGIRSA FVGYSEQTAY SAITAILREG
AEVAEAVAGE MVEVVVDTTP FYGASGGQAG DTGVISTGSA HLRVVATSKP FPDLTVHRAL
VTEGTVKAGD AADLRVATEV RGATARNHTA THLLQSALRQ VLGEHVKQAG SLVTAERLRF
DFTHFSAMTV EELRRVENIV NTYVMDNADV KSLEMAATEA MQSGATALFG EKYGDRVRVV
KVGEVSSELC GGTHVRAAGD IGFFKIVGEA GIAAGVRRIE ALTGSGALEY VQQLEDEQRS
IAVLVKAEGG TALDKVDRLL ARQKELQREV EALQARLNAS RSADLLAGAR ETNGIKVLAA
KVEMDDPKGL RELADSLKDR LQSGVIVIGC VSAGKANLLV AVTKDLSDRL RAGDIIKSLA
PIIGGSGGGK PELAQAGGTK PENLDEALEA AYKIIG
|
|---|
| |