| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_0118 |
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| Symbol | |
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| ID | 5163757 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter uraniireducens Rf4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009483 |
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| Strand | - |
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| Start bp | 159658 |
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| End bp | 161433 |
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| Gene Length | 1776 bp |
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| Protein Length | 591 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640547616 |
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| Product | sigma-54 dependent trancsriptional regulator |
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| Protein accession | YP_001228907 |
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| Protein GI | 148262201 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTTTTA ATACCGATCC GACGTTATTC ATCAATTCGC CGCTGAGCAA TGCGCCGCTC
AATTCCGACG ATTTCTATCA GGCGCTGGTA AACGCCATGG GAGTTGGGGT TCTGGCCGTC
AACACCTCCG GCATGACCAT TCTTGCCAAC AAGAGCGCCC GCGAGAATTT CGGCGCTTAT
CCCGGCATCC ACCTGAACGA CGTCCTGCCG GAACTTTGGC CGAAGGTCGT GCAGCGCCTC
AGAAAGCACA CCCACAGCAT TGAAGTGTCG GTACGGGGCG GGGAAGCGAA CTACCTGGTC
AGGGTAAGTC CGATCCTCCT GGATAAGGAG CAAGTCGGGG CCGTCTGCGT TTTTGTGGAA
AGTACGGGCC TGGAAGAAAT GGCGATGCAG ATGCAGACGT TTCAGGAGTT GACCAGTGAA
TTGGGCGCTA TAATCAACTC CTCTTCCGAC GGGCTCTGGA TCTGCGACTC GCAAGCCAAT
GTGCTCCGTA TAAATCCGGC GTCGGAGCGA ATCAACCATA TTAAGGCGGA GGACGTCGTC
GGCCACAATA TGCGTGACCT GGTGGCAGAA GGGGTTTTCG ACAAGTCGGC CACCCTTGAG
GTGCTCAGAA CCGGAAACGT TGCGAACATG CTGCAACAGC GGGAAGGACG CAAGCTGATC
CTGACCGGCA CCCCTGTTTT CGATACAGCC GGACGGCTGA TCAGGGTCGT GGTGAGCGAA
CGCGACATTA CCGAGATCGA TATCCTGCAA CGGGAGTTGG AGGAGCAGGA GGCCATGAAA
GACCAGTTCC GCCACCACAT GATCGAGAAG CAGCAGGTGG AGCTGGAGTC GCATCGGGTC
ATAGCCCGGA GCCCCGTCAT GCTCAAGGCG CTCCATCAGG CGATCAAGGT CAGTACCGTT
GACTCGTCGG TGCTGATTCT CGGCGAATCC GGCGTGGGAA AGGGGCTGAT CGCCGACCTG
ATCCACAAGA ATTCACTGCG GGCGAAAAAG CCGCTCATCA AGATCAACTG CGGCGCCATC
CCTGAATCCC TGATTGAATC CGAGCTGTTC GGCTACGAGA AAGGCGCCTT TACCGGCGCC
CAAGCCGGCG GCAAGCCGGG ATATTTCGAG CTGGCAGATG GGGGAACCCT CTTTCTTGAC
GAGATCGCCG AGCTCCCCCT CTCCTCGCAG GTCAAATTGC TCCGCTTCCT TGAAGACGGC
CGCATCACAC GTCTTGGCGG GACCAACGGA CGCACCGTTG ACGTCCGCAT TCTCGCGGCG
ACCCACCGCA ACCTGGAGGA GATGGTCAGC CAGGGGAAAT TCCGGCTTGA TCTCTATTAT
CGATTGAAAG TCATCCCCAT CTATGTCCCG TCTGTACGGG AGCGGAAAGA CTGCATACTG
CCTCTCATTC ACCATTACAT CGACTTTTTC GGGACGAAGA CCGGCATCAA GAAACGGCTT
ACCCGGGCCG CCTCGGACAT TTTGATGTCT TACCCTTATC CGGGCAACGT GCGCGAGCTC
ATGAACATCT GCGAGCGACT GGTTGTCATG TCCGAAATGG AATTGATCGA TCTCAAGGAC
CTTCCCGGCG ATATCGTCGC CCGCGTGGAG GAAACGGGCA AGGCATCCAT GGCTTGGCCT
GAAGAAATGA GCCTGCAACA GGCAATCGAC AGCGTAGAGC GAAACGTCCT TGCCCAGGCA
GTGGAGCGAT ACGGCAACCA ATGCAGGATG GCTGAGGTCT TGGGGGTGAA TCAATCCACC
ATCGCCCGCA AACTCAAGAA GTACGGCTTG ACCTGA
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| Protein sequence | MSFNTDPTLF INSPLSNAPL NSDDFYQALV NAMGVGVLAV NTSGMTILAN KSARENFGAY
PGIHLNDVLP ELWPKVVQRL RKHTHSIEVS VRGGEANYLV RVSPILLDKE QVGAVCVFVE
STGLEEMAMQ MQTFQELTSE LGAIINSSSD GLWICDSQAN VLRINPASER INHIKAEDVV
GHNMRDLVAE GVFDKSATLE VLRTGNVANM LQQREGRKLI LTGTPVFDTA GRLIRVVVSE
RDITEIDILQ RELEEQEAMK DQFRHHMIEK QQVELESHRV IARSPVMLKA LHQAIKVSTV
DSSVLILGES GVGKGLIADL IHKNSLRAKK PLIKINCGAI PESLIESELF GYEKGAFTGA
QAGGKPGYFE LADGGTLFLD EIAELPLSSQ VKLLRFLEDG RITRLGGTNG RTVDVRILAA
THRNLEEMVS QGKFRLDLYY RLKVIPIYVP SVRERKDCIL PLIHHYIDFF GTKTGIKKRL
TRAASDILMS YPYPGNVREL MNICERLVVM SEMELIDLKD LPGDIVARVE ETGKASMAWP
EEMSLQQAID SVERNVLAQA VERYGNQCRM AEVLGVNQST IARKLKKYGL T
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