Gene Gura_0094 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGura_0094 
Symbol 
ID5165680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter uraniireducens Rf4 
KingdomBacteria 
Replicon accessionNC_009483 
Strand
Start bp134192 
End bp134974 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content56% 
IMG OID640547592 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_001228883 
Protein GI148262177 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0745635 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCCGATA ACCTTACGGA ACTTTTCGAC CGGCTGTATC GCGACAACCA GGCGATGGTG 
TACAAGCTGG CCCTGGGGCT CACCGGCAAT GGGCATGACG CCGAAGAAAT AACCCAGGAG
GCGTTTTCCC GGGCTTTCCG TTCCTACCAT ACCTTTCGCG AAGAGTGCTC CTTTTCCACC
TGGATCTATC GCATCACCAT CAACGTTGCC AACGATTACC TGAAGCTGAG GGCCAAATTC
CCGGTCCATG CGCTTACCGA GGATCTGGGC TATTCTCTGG AAGAAATCAT CGACCCTGAT
CCCGCCAACA ACCCGGAAAC CGAACTCCTT GCCTACCAGG CAAGGGCGAA GTGTCTGCAC
GCCATGACGG AATGCCTTCC GACCGAACAG CGAAAGGTAT TTTGCCTGGC AATCACCCTG
GGCCTTCCCC ACAAACTCGT CGCTGAAATT CTCGACTGCT CGTTGAGTTC GGTCAAAACC
ACCCTCCACC GGGCCAAGAA AAGATGGTTC GGTTACATGG AAGACAGGTG TCAGCTGATC
AGGAAATCGA ACCCCTGCAG CTGCAAGCAG TGGGTCCGCT TCGGCCTGTC GCAGGGGTGG
ATATCTAAAC AGGCCTTGGC CGATCCCCGT CAGCCGATTA CAGCAGAAGC CAGGGAAGAA
GTGGCCAGGC TGAAGGCGCT GCGGGACATC TACCAGGACC TTTACCGGGA AACGGCCGAC
GCATCTTATG CGCAAAGGAT CAGGGAAGGG ATACAAAACA GCGAATGGGC CATTTTTTCC
TGA
 
Protein sequence
MSDNLTELFD RLYRDNQAMV YKLALGLTGN GHDAEEITQE AFSRAFRSYH TFREECSFST 
WIYRITINVA NDYLKLRAKF PVHALTEDLG YSLEEIIDPD PANNPETELL AYQARAKCLH
AMTECLPTEQ RKVFCLAITL GLPHKLVAEI LDCSLSSVKT TLHRAKKRWF GYMEDRCQLI
RKSNPCSCKQ WVRFGLSQGW ISKQALADPR QPITAEAREE VARLKALRDI YQDLYRETAD
ASYAQRIREG IQNSEWAIFS