Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gura_0071 |
Symbol | prpB |
ID | 5164038 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter uraniireducens Rf4 |
Kingdom | Bacteria |
Replicon accession | NC_009483 |
Strand | + |
Start bp | 92423 |
End bp | 93313 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640547569 |
Product | 2-methylisocitrate lyase |
Protein accession | YP_001228860 |
Protein GI | 148262154 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2513] PEP phosphonomutase and related enzymes |
TIGRFAM ID | [TIGR02317] methylisocitrate lyase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACGTTA AGCACACTCC AGGCGGATTG CTGCGTGCTG CTCTCAGCGA GGAAAAGCCG CTGCAGGTTG CCGGGGTTAT CAATGCCTAT GCAGCCCTGA TGGCGGAGCA AAGCGGATTT CGTGCCCTGT ATCTTTCCGG GGCCGGCGTG GCCAATGCTT CCTTCGGCCT CCCCGATCTG GGGATGACCA CTCTTACGGA TGTACTGGAA GATCTGCGGC GAATAACCGG TGCCACCGGT CTGCCGCTCC TGGTTGACGT GGACACCGGC TGGGGACACG CGTTCATGAT CGGCCGCACC ATCCGGGAGA TGAGCCGGGC AGGAGCCGCC GGGGTACATA TTGAGGATCA GGTGGTTACC AAGCGGTGCG GACATCGGCC GGGCAAGGCT CTGGTCGGCG CCGAAGAGAT GGTGGATCGG ATCAAGGCGG CGGTAGATGC CCGGATCGAC CCCGATTTCG TCATCATGGC CCGGACCGAT GCGGTGGCGG TGGAAGGACT GGAAGCCGCC ATCGAGCGGG CCTGCCGCTA CCGTGACGCC GGAGCGGACA TGCTCTTCCC CGAGGCACTC ACCGAGCTTT CCCACTATCG GCGGTTTGCG GATGCAACCG GCCTGCCGGT GCTCGCCAAC ATGACCGAGT TCGGCGTCAC CCCCTTGTTT GATATCGAGG AACTCGCCGC CGCCGGTGTG AGCCTGGCCC TCTATCCGCT CTCGGCATTC CGTGCCATGT CTGCCGCAGC CCTGCGGGTT TACCGGGCGA TCCGGGAGGA GGGGACGCAG AAGAGTGTCG TTGACATCAT GCAGAGCCGT GCCGAACTCT ATGCGTTCCT CGGCTACCAT GACTACGAAC GTAAACTGGA CGAGCTGTTC GGAAAGGAGG AAAAACTATG A
|
Protein sequence | MNVKHTPGGL LRAALSEEKP LQVAGVINAY AALMAEQSGF RALYLSGAGV ANASFGLPDL GMTTLTDVLE DLRRITGATG LPLLVDVDTG WGHAFMIGRT IREMSRAGAA GVHIEDQVVT KRCGHRPGKA LVGAEEMVDR IKAAVDARID PDFVIMARTD AVAVEGLEAA IERACRYRDA GADMLFPEAL TELSHYRRFA DATGLPVLAN MTEFGVTPLF DIEELAAAGV SLALYPLSAF RAMSAAALRV YRAIREEGTQ KSVVDIMQSR AELYAFLGYH DYERKLDELF GKEEKL
|
| |