Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gura_0054 |
Symbol | |
ID | 5165020 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter uraniireducens Rf4 |
Kingdom | Bacteria |
Replicon accession | NC_009483 |
Strand | + |
Start bp | 63613 |
End bp | 65016 |
Gene Length | 1404 bp |
Protein Length | 467 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640547553 |
Product | response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor |
Protein accession | YP_001228845 |
Protein GI | 148262139 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGATAT GTGTAAAATC GGCGTATTTC ATCGGCGCCC TTATTGGGGA AACCGTGGTT CCAGGTGAAG GAGCAATTGT GGTTGATACA AAATCAGTTC GCATATTATA CATGGAAGAC GATGCCGGTT TGGCCCGCAT TTTACAAAAG ACCATGCAGC GGCTGGGGTA TATTATCGAC CTGGCGGGCA ACGGCGAAGA AGGTCTGGCC ATGGCAGAAA GGAGAGAGTA CGATACCGTC CTGGTCGATT ACAACATGCC GGTATGCGGA GGTATTGATG TACTCCGTAT ACTGACCGCC CGGCAAAAGC ATCCACCGGT GATAATGGTT ACCGGCAACG GAAATGAAAA AGTTGCGGTC GAGGCGCTCA AGTTGGGCGC AACCGATTAC ATAGTCAAAG ACGTTGATAT GGGGTATCTG GAGTTGCTCC CGCTGGTCAT CGGCCAGGTG CTGCAAAAGC AACACCTGAT CAACGAGCGG GAGCAGATGC TTGCGGCAAT GCAGGAAAGC GAAGGACGCT ACAGGAAACT TGTCGAGCTT TCGCCGGACG GGATAGTAAT TTGCGCCCGG GGCCGTTTCG TATTTATAAA CCCGGCAGGA GTAACGCTCC TTGGCGCACC CGGGCCGAAA GAGCTGTTGG GCATGGCGAT GATCGATTTC GTGCACCCCG ATTACAGGGA TATCTTCAAA GCGCAGATGC GGCAACTGGA GGATAATGGC TACAATGTGC CGTGGATCGA AGAGAGGTTC ATACGATTCG ACATGGCGGA CATCGACGTG GAAGTGTCCG GGGTCCCTTT CACGTTTCGA GGAGAAGCGG CAGTCCAGAT CATCTTTCGA GACATAACCG AGCGAACCCT CGCCAAGCGC CGCCTGGAAC AGATGGCCCA TTACGATACC CTGACATCCC TTCCCAATCG CGCCCTGTTT TTTGACCGGT TCACCACCAT GCTGGAGCAG GCCAAGAGAT ATGGGACTGC TTTCGCCCTT TTGTACCTGG ATTTAGACAG TTTCAAGCAG GTAAACGATA GCCTGGGACA CGATGTCGGC GACCTTTTGT TGAAGAAGGT TACGGAGAGG CTGACGGGCA ATCTGCGTAA ATCGGATACG GTGGCCCGTA TGGGAGGGGA CGAGTTTACG GTCATACTTT CGCGGATAAA TGAAAGGGAA GATGCAGCCG TCGTTGCCAG AAAAATCATC TATGTCCTTT CCATGCCGTT TGATTTGAAG GGAAATCAAT GCTCGATCGG GGTCAGCATC GGGATCAGCG TTTTTCCCGA CGATGGTGAC GATACCGAAA CGCTTCTGAA AAATGCCGAT ACAGCCATGT ACAGTGCCAA GGAAAGTGAC CGCGAAAAAT ATCAGTATTA TGTCTCTCCT GAAGCCGTTG AACAATCAAC TTGA
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Protein sequence | MPICVKSAYF IGALIGETVV PGEGAIVVDT KSVRILYMED DAGLARILQK TMQRLGYIID LAGNGEEGLA MAERREYDTV LVDYNMPVCG GIDVLRILTA RQKHPPVIMV TGNGNEKVAV EALKLGATDY IVKDVDMGYL ELLPLVIGQV LQKQHLINER EQMLAAMQES EGRYRKLVEL SPDGIVICAR GRFVFINPAG VTLLGAPGPK ELLGMAMIDF VHPDYRDIFK AQMRQLEDNG YNVPWIEERF IRFDMADIDV EVSGVPFTFR GEAAVQIIFR DITERTLAKR RLEQMAHYDT LTSLPNRALF FDRFTTMLEQ AKRYGTAFAL LYLDLDSFKQ VNDSLGHDVG DLLLKKVTER LTGNLRKSDT VARMGGDEFT VILSRINERE DAAVVARKII YVLSMPFDLK GNQCSIGVSI GISVFPDDGD DTETLLKNAD TAMYSAKESD REKYQYYVSP EAVEQST
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