Gene Gura_0010 details

Gene Information

• Locus tag: Gura_0010
• ID: 5163645
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter uraniireducens Rf4
• Kingdom: Bacteria
• Replicon accession: NC_009483
• Strand: +
• Start bp: 15519
• End bp: 17333
• Gene Length: 1815 bp
• Protein Length: 604 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 640547509
• Product: multi-sensor signal transduction histidine kinase
• Protein accession: YP_001228801
• Protein GI: 148262095
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase)
• TIGRFAM ID: [TIGR00229] PAS domain S-box

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGACAAGG GGAGAAAAAT ATCAGCCAAG ATTGCTGCGA TCTACGCTCT GTTCGGAGGA 
ACCTGGATTC TTTTTTCCGA CGAATTGCTC GCGCATCTCG TGCACGACCA GCCCACCGCC 
ACCATAATCT CAGTTTACAA AGGGTGGCTC TTTGTGGCAG CCACGGCAAT GATGCTCTAC 
CAGCTTGTCA AGCGCCATAC GACCCTGCTC ATCGATTCGG AAACCGAGCT CCAAGAGCGC 
AATGAGGAGT TGGCGGAGAC CGAGGAGGAA TTGCGGCAGC AGATTGACGA GTACCATAAA 
AGCCAGGCTG AACTGTATGA GACCAACCAG ACGTTGTTGA CACTGTTCCA GGCGTCGCCG 
CTGGCTATAG TCTCCCTTGA CCTGCATGGA CGGGTAACCC TGTGGAATCA GGCAGCCGAG 
TGGCTGTTCG GCTGGGAAGC TGGCGAGGTA ACCGGCCGAC TCTGTCCACT TATTCCTTCC 
TTTGATACCG AAGCATGGCA AAGATTTTTT GAAAATACCA TCCAGCGAGA GGTGTTAAAC 
AACATAGAGG TGCGCCGGCA GAAAAAAGAC GGCGCTCTGA TCGACGTCAG CATGTCAATG 
GCGCCGGTCC GCGACGCAAG CGGGGAAATC GCAGGGATCA TGGTGGTGAT GGCGGACATT 
ACCGAGCGCA GAGAAACCGA AAAAGCGTTG CGGAAATCGC ACCAGCTCTA TGGGGAACTT 
GTCAACTCCA TTGACGGGGT TGTATGGGAA ATGGATGTGG CAACTTTCTG TTTCACCTTT 
GTCAGCGAGA GGGCCGTTCA AATCCTTGGT TATCCCGTTG AACAATGGCT CGATGATCCC 
GCATTCTGGC AGGACCATGT CCATCCCGAC GACCGTGCAT GGGCTCTGGA ATACTGCATG 
GGTGCAACCA GAGAGATGAA GGACCACGAA TTCGAGTACC GGTTCATTGC CGCAGAAGGG 
AACATCGTCT GGTTGAGGGA CATAGTTATC GTGGTGGTGG AGAACGGGCA GCCGGTCAAG 
CTCCGTGGCG TCATGCTTGA CGTAACCGAT CGCAAAATGG CCGAGGAGGA AATTCGCAAA 
CTGAACGCAG AACTTGAACA ACGGGTCAGA GAGCGCACCG CCCAACTGGA GTCGGCTAAC 
AAGGAGCTGG AATCCTTCAG TTATTCTGTT TCCCATGACT TGCGGGCGCC TTTGCGCCAT 
ATTGACGGCT TCAGTCGGGT GCTGCTGGAA GATTACCGTG AAAAAATCGA TGGGGAGGGG 
AAAGACTATC TGTTTCGCCT CCGTAATGCG AGCCAGCGGA TGTCGCAGCT GATCGACGAT 
TTACTGAAAC TGTCGAAAGT TACCCGCAGT GAGCTCAACC GGCAGCAGGT AAACCTGAGC 
CGGATGGCGC AGGTTACCGT GCTGGAACTT AAGCAGGCCC AGCCGCAACG GCAGGTATCG 
GTAAAGATTG CAGAAGACGT GACGGCAAAC GGTGATGCTC GATTGCTCCG TGTGCTTATG 
GAGAATCTGC TGGCAAATGC CTGGAAATAC TCGGGCAAAC AGGAGTCGTC GATTATCGAG 
TTCGGCACAG CCGAGGTTGC GGGAGAAATG ACCTATTTTA TCCGCGACAA CGGTGTCGGA 
TTTGATATGG CATATGCGGA CAAACTGTTT GCCGCATTTC AGAGGTTGCA CCGGTCAGAC 
GAATTTGAAG GGACCGGTGT CGGGCTGGCT ACCGTACAGC GGATCATCAA TCGTCACGGG 
GGACGGATCT GGGCGGAAAG TGCGGTCGGA GCCGGCGCGA CCTTTTATTT CACTTTGAAC 
GGAGTAGCCA TATGA 

 

Protein sequence

MDKGRKISAK IAAIYALFGG TWILFSDELL AHLVHDQPTA TIISVYKGWL FVAATAMMLY 
QLVKRHTTLL IDSETELQER NEELAETEEE LRQQIDEYHK SQAELYETNQ TLLTLFQASP 
LAIVSLDLHG RVTLWNQAAE WLFGWEAGEV TGRLCPLIPS FDTEAWQRFF ENTIQREVLN 
NIEVRRQKKD GALIDVSMSM APVRDASGEI AGIMVVMADI TERRETEKAL RKSHQLYGEL 
VNSIDGVVWE MDVATFCFTF VSERAVQILG YPVEQWLDDP AFWQDHVHPD DRAWALEYCM 
GATREMKDHE FEYRFIAAEG NIVWLRDIVI VVVENGQPVK LRGVMLDVTD RKMAEEEIRK 
LNAELEQRVR ERTAQLESAN KELESFSYSV SHDLRAPLRH IDGFSRVLLE DYREKIDGEG 
KDYLFRLRNA SQRMSQLIDD LLKLSKVTRS ELNRQQVNLS RMAQVTVLEL KQAQPQRQVS 
VKIAEDVTAN GDARLLRVLM ENLLANAWKY SGKQESSIIE FGTAEVAGEM TYFIRDNGVG 
FDMAYADKLF AAFQRLHRSD EFEGTGVGLA TVQRIINRHG GRIWAESAVG AGATFYFTLN 
GVAI