Gene Gura_0003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGura_0003 
SymbolrecF 
ID5164517 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter uraniireducens Rf4 
KingdomBacteria 
Replicon accessionNC_009483 
Strand
Start bp2810 
End bp3904 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content44% 
IMG OID640547502 
Productrecombination protein F 
Protein accessionYP_001228794 
Protein GI148262088 
COG category[L] Replication, recombination and repair 
COG ID[COG1195] Recombinational DNA repair ATPase (RecF pathway) 
TIGRFAM ID[TIGR00611] recF protein 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTAA ATAAAATATA TCTTTTATCA TTCAGGAACC TGGAAAAAAT TGAACTGACA 
CCGGCGCATC GCTTTAATAT TTTTTACGGC AAGAATGCCC AGGGAAAGAC CAACTTACTG
GAATCAATCT TTCTGCTCGG CACCATGAAG TCGTTTAAGA TGGCAAAAAA CAGCGAAATG
GTAAGGTGGG GCTCGGATCA AAGTCTTATA AAAGGCTGGG TCGAACGGGA TGGCGTAACC
AGAGAAATTG CACTCTTTAT TGATAAACAG GGAAAAAAAA TCAAGCTGGA CCGGAAATCG
GTAACAAAGG TTGATGAATT TTTCGGCAAC CTGAATGTCG TGGTTTTTAC GCCGGAAGAA
ATCAATATGG TCAGGGGGGT ACCCGATCTC CGGAGAAAAT ATCTCGATCG GGCGGTATTC
AGTAGTGATG TAACATACCT CCACGCTTAT CACGATTACT GCAAGATCCT GAAAAACAGG
AACATACTTT TAAAGAGCGG TGAAAAATCA GGGCTCGATG TCTGGACGGA AAAGCTTGCA
GAGTACGGCA GAAAAGTCAT CAACAAAAGA CTGGACTATC TCCATGAAAT ACAGGAATTG
TTGAGTAAAT TTTACAATGA CATTTCGGGG ACCGAAGAGG TGGTGGAGAT TAGATACCGA
CCACACCTGA TGGATATGGA GAATTACGAA AAAGATAACT GCGGGGCACT GAGCGAGGCA
CTGGTGAAGT GTGCGGCTGA GGAACAGCGC AGAGGAACGA CATTGGTCGG TCCGCACCGC
GATGATATAG ACTTTGTGCT TAATGGCAGG GCATTGAAAC AGTTTGGATC CCAAGGTCAA
CAAAGAAGCT ATGTGCTGGC ACTAAAAATG TCTGAAATAG ATTGCTTGCA CCAAAAGTTC
GACAGCCCGC CGATTCTGCT TCTCGACGAC ATGACCTCAG AACTTGATCA GGACAGAAAC
CGAAACCTGA TGGAATTTTT GAAAAAAAAA GAGATGCAGG TTTTTATAAC CACCACATCT
TTGCAGAACA TATCACTGGA AGGAATTGAA AACCACAGAA CGTTCCTCGT CAGCGAGGGA
AAGGTTCTTC ACTAG
 
Protein sequence
MKLNKIYLLS FRNLEKIELT PAHRFNIFYG KNAQGKTNLL ESIFLLGTMK SFKMAKNSEM 
VRWGSDQSLI KGWVERDGVT REIALFIDKQ GKKIKLDRKS VTKVDEFFGN LNVVVFTPEE
INMVRGVPDL RRKYLDRAVF SSDVTYLHAY HDYCKILKNR NILLKSGEKS GLDVWTEKLA
EYGRKVINKR LDYLHEIQEL LSKFYNDISG TEEVVEIRYR PHLMDMENYE KDNCGALSEA
LVKCAAEEQR RGTTLVGPHR DDIDFVLNGR ALKQFGSQGQ QRSYVLALKM SEIDCLHQKF
DSPPILLLDD MTSELDQDRN RNLMEFLKKK EMQVFITTTS LQNISLEGIE NHRTFLVSEG
KVLH