| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_p0285 |
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| Symbol | |
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| ID | 5148688 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009475 |
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| Strand | + |
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| Start bp | 216307 |
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| End bp | 219987 |
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| Gene Length | 3681 bp |
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| Protein Length | 1226 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640539158 |
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| Product | putative DEAD/DEAH box helicase-like protein |
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| Protein accession | YP_001220591 |
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| Protein GI | 148241090 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1204] Superfamily II helicase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTAGGC TCGACGAGCA GAGGCGCGAA CTGGCGCTGA GTCTTAGGGC TCGTGCGATC
GAGAACGAGC TCACGCCAAC GCAGGCCCGG CTGTTCGTTC GAAGCCTCCA GATCTCCTGG
CAGGTCCCAC CGATCGGATG GACGGAGCGG GAGTCGCATG AGCAGCTCGC GGACGCACGC
CGCCTGCTCC ACGCGGCATC AATCCTTCGC GAAGTGGACG GTCAGGCCTC GCCGGATTCG
CTCGCCTGCT ATCGTCGAGC GGCGGAGCTA CTCGAATGGC TAGCTCGATC CTCCGACCCC
GTCACCAGAG ACGTGCCGGT GGCACTGCTG GCCGCAGGGG CATACCAGCT TGCGGGCTTG
CCAGCCATGG CGACGAGCTT GTTGCGACAG GGGCGGTACG GCGCTGGCAT CGCTGAAATT
TTCGCGGACT TCCTAAGCGC CGATTTCGAC GGCCTGCTTG AGCATTGCGC CCTCTTTTGG
AGCGATCATC CGGAGCTGAC GGGTCGTTCC GGTTCAGCCA GGGTCCTCGA TGGCGCCGAC
CTCGCGGACG ACGAGACCGA CGATCCGGCA ATCGACGCGG ATGCCGTGGA TGCGCCCCGT
CGGGAAGCTC GCCCGGAAAG CCCGGTCGGG TGGTACGTGC TCGTGGAGGT CATACGCGTC
CTCGGGCTTC TCGGCGACGC TATGCGACGC GGAAATCAAG GTCGGGTCGA ACAGGCGCTG
AGTAAGCTCT CAGACCTAAA CATGCTTGCC ACTCGGCTTT CCAGCGAGGA GCTCTGGATA
CTCATCAACC TGACCGAATC GACGGCGAAG CGCTTCGCCG ACAACAGCCT GCACGGGCGC
GTTCGGCGGC TTGCAGAAAA CGCGCCGAAC CAACAGGCCC GCATGTGGCG CTTCGCTCGT
GAGCAGTTCG CCAGAGGACG TGGCGTGCTG TGGGCCTCGC AGGTTCAAGG CCTTGAACGC
CTCATTGCGA ACAGCAGCTT CGCACTCTGC ACGCCGACAG GCTCCGGCAA GACACTCGTC
GCAAATTTGG CGCTCGTGAA GGAATTGCTC CTTGTCGATG CGCAGCCGGG CGAGGCGCCG
CTTGCGTTAT ACTTGGTCCC CTCCCGCGCA CTCGCGAGCG AAGTCGAGAC AAAACTGACC
GCGGAGCTCG GTAGCGATCT CATCATCACC GGCCTGTACG GCGGCGCGGA TTGGGGCATT
ACAGACTATT GGCTAACGGC GGACAGAGCG GTTGTATTGA TCGCAACGGT TGAAAAGGCT
GAGGCGCTCC TGCGATACGT CGGTCACCTG CTAACCCAGC GACTGCGCTT GTTGATAATA
GATGAAGCGC ATCAGGTGGT GAGCGAGGAC GATGTCACCA CAAGGGAGGC CCTAGCCGCC
CACACCAGCC GTGCCATGCG CATTGAAGCG ATGGTCACGC GCTTGCTCGC GACCAAACCT
GGCATGGCGC GGATCGCGCT CACGGCGGTC GCGGGCGGCG CGGCACGCCC CGTCGCTCGT
TGGATCGAGG GGCGGGCTGA CGCCGAGCCC GTCGGGATAG GCTACAGGAG CAGCCGCCAA
CTGATTGGCG CCCTGAGAGT GGCTTCGCGG CGCGTGCCGG AGGCAATCCT CGACATCATG
AACGGACAGA TGTTGTACGT TCGCGGGCGC GATCAACCTG TCTACCTTCC ACTGCGGATT
CCGGCGATGC CGGATCCCGC AGCACCTGTT CGCGACAGCC TTCCGCATTT CACCGAGCTA
TATGTCTTGT GGACCGCTCT GCATCTCCTC GAGGGCGGAC GCCGCGTCTT GATATCGGTG
GCCCAGGCGC CCGAGCGCCT GATGAAGCGC TATGCCGAAG CAGTCGCTTT CGCCAGTTGG
CAGAACGTGC CGCCATTCGC GCCGCCTACC GACGCCGACG GCCTTGCGCG CTACCGGGAG
GCTCGCTTGG CATGCCTCGA CTATTGCGGG CCCGAGTCTT TCGAACTTCG GTTGCTCGAG
AGAGGGATTG CAACGAGCCA CGGCCAGATG CCTCAGCGCT TGAGGCGCCT GATGACCGAC
CTGATCGATC GGAGAATCTG CCCCATCACG GTGGCGACAG CCACACTGAC GGAAGGGGTG
AACCTGCCAT TCGACATCAT CTTCCTGACA AGCCTCGAGC GCCGCAGTTT TGATCCTCAG
ACCGGTCAAC CGGTCGTCGT GCCAATGTCG ACGGGGGAGT TTCGCAACCT CGCTGGAAGG
GCCGGGCGTC CAGGCGCCGC TCAATCGATA GAAGGGATCA CGCTCGTCGC TGTACCCGAG
ACGATATCGT CGACGGCCCC CGCGAAACGC CGGGCCCAGC AAAGGCAGGT TCGTGCGAGA
TCAGCAGAAT ATGACAATCT CCTGTTCCGC CTGCGCGCCG ACGAAGAGGT CGGTGGCGCC
GGGAGCCCGC TCGCGGTGCT GCTGCGGTCG ATCGCAAATC GCGCGATTAC TCAATTCGGC
CTGCAGACGG AGGAGCAATT TCTTGCTTGG CTGGAGGCGA CACTTCCTGA GGGGGCCGGA
GCGAACCTCG GGGTGGCGTC GCGGACGCCG CACGATTTGT TGGGCGACAG CTTGGACGAA
TTAGACGGGT TCTTGCTGGC AGCGATCGAA GAGCTGGCTC GCTTCGAACA AGCAGAGGTG
AACGGCCCGC GTGCCGAGGT CTACTTGCGC GGCTTGTGGC AACGTACCTT TGCGCAGGTG
TCGGCGGCCG AGGAGGCCTG GCTGGAACGC AGCTTCATCA AGCGTGGCAG AGCGTTTGTC
GAGAGACTCT ATCCCAATGC ACTGCAGCGT CGAAGGCTCT ACCAGTACGG CTTTACACCC
TACATCGGTC GCCGCTTCGA GCTCGTCGCC CCTCAACTGG TCGCAGAGCT CTTCGCGGCT
GCCCAATACG GGACATGGAC AGCAGAACAA CGCTTCGATT TGTTTGTTCG ACTGGGTGAG
CGCATCCGTG CGGAGCCCGG GATCGGCTTT CGTGTTCGTC CGACCCCCGG TGACCAGCAG
CTCCTCGCCG ATTGGCGCGG CATCCTGGGC TGGTGGACAC AGCGCCCAGG CGCAGTGGCG
CCGAGCGCGG ATAGACTGCG GTCCTGGCAA CGTTTTGTCG GAGACAATCT TGAGTTTAGA
CTAGGCGTCG CAGTGGGTGC AGCCGTAGCC CAAGCGTGGA ATGCTAACGC AGGAGCGCTC
GAGACGCCCA GTCTGCAAAC CTGGCGCGCG ACCACGAACC TGCCATGGGT CGCCTTCTGG
TTCCGGGAGC TGCTGCGCTG GGGAACACTG GATCCTTTCG TCGCCTTCTC GCTGTCGCAG
GGCCTGGCTC AAACCAGGGA GGCTGCGGCC GCGCGACGCG CCGAGTTCGA AGTCTGGCTT
GCAGCACAAG GCGCGGGGCT CGAGGCCGAG ACCCTGATCG ATCCGCAATG GTTTCTCGCC
TGGCAGAGGT CCCTCGCCGA TCGGAATGTC GCGCAGGAGA TCGTTCGAGG GAATGCCGCC
GCGTTAACAG GGACGGACGG CCGGCAGGGA GTATATGACG TTCGGCCGAT CGTTCGTGGC
GACCGTGTCG ATTGGATAGA TGCTGCGGGA TATTCACTGG CGAACTCCGC CATCTCGCCC
GCACTCCTGA CAAACCGTCC GGAACGTCAC GATTTCCGGC TTTCAACCAT TCAAGCGCCA
GAGGTTACGC GAACGTTCTG A
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| Protein sequence | MARLDEQRRE LALSLRARAI ENELTPTQAR LFVRSLQISW QVPPIGWTER ESHEQLADAR
RLLHAASILR EVDGQASPDS LACYRRAAEL LEWLARSSDP VTRDVPVALL AAGAYQLAGL
PAMATSLLRQ GRYGAGIAEI FADFLSADFD GLLEHCALFW SDHPELTGRS GSARVLDGAD
LADDETDDPA IDADAVDAPR REARPESPVG WYVLVEVIRV LGLLGDAMRR GNQGRVEQAL
SKLSDLNMLA TRLSSEELWI LINLTESTAK RFADNSLHGR VRRLAENAPN QQARMWRFAR
EQFARGRGVL WASQVQGLER LIANSSFALC TPTGSGKTLV ANLALVKELL LVDAQPGEAP
LALYLVPSRA LASEVETKLT AELGSDLIIT GLYGGADWGI TDYWLTADRA VVLIATVEKA
EALLRYVGHL LTQRLRLLII DEAHQVVSED DVTTREALAA HTSRAMRIEA MVTRLLATKP
GMARIALTAV AGGAARPVAR WIEGRADAEP VGIGYRSSRQ LIGALRVASR RVPEAILDIM
NGQMLYVRGR DQPVYLPLRI PAMPDPAAPV RDSLPHFTEL YVLWTALHLL EGGRRVLISV
AQAPERLMKR YAEAVAFASW QNVPPFAPPT DADGLARYRE ARLACLDYCG PESFELRLLE
RGIATSHGQM PQRLRRLMTD LIDRRICPIT VATATLTEGV NLPFDIIFLT SLERRSFDPQ
TGQPVVVPMS TGEFRNLAGR AGRPGAAQSI EGITLVAVPE TISSTAPAKR RAQQRQVRAR
SAEYDNLLFR LRADEEVGGA GSPLAVLLRS IANRAITQFG LQTEEQFLAW LEATLPEGAG
ANLGVASRTP HDLLGDSLDE LDGFLLAAIE ELARFEQAEV NGPRAEVYLR GLWQRTFAQV
SAAEEAWLER SFIKRGRAFV ERLYPNALQR RRLYQYGFTP YIGRRFELVA PQLVAELFAA
AQYGTWTAEQ RFDLFVRLGE RIRAEPGIGF RVRPTPGDQQ LLADWRGILG WWTQRPGAVA
PSADRLRSWQ RFVGDNLEFR LGVAVGAAVA QAWNANAGAL ETPSLQTWRA TTNLPWVAFW
FRELLRWGTL DPFVAFSLSQ GLAQTREAAA ARRAEFEVWL AAQGAGLEAE TLIDPQWFLA
WQRSLADRNV AQEIVRGNAA ALTGTDGRQG VYDVRPIVRG DRVDWIDAAG YSLANSAISP
ALLTNRPERH DFRLSTIQAP EVTRTF
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