Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_p0260 |
Symbol | traR |
ID | 5148619 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009475 |
Strand | + |
Start bp | 191522 |
End bp | 192253 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640539137 |
Product | LuxR family transcriptional regulator |
Protein accession | YP_001220570 |
Protein GI | 148241069 |
COG category | [K] Transcription |
COG ID | [COG2771] DNA-binding HTH domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGGTG TCAAACGAGC ATGCGATGAA TTTGTCGATT GTCTTCACTC TGCCCATACA GAAGAGGATT TTCGGCGTGT CGCGGAACGA ACCGCGCATG CATTGGGTTT CCGCTGGTTC GCCTATTTTG GCCACCGCGC CAATGGCCCC AAACTGATCT CTTCCTATCC GAAGAGTTGG ACAAGTCACT ATTTTCGCGA AGGATACGAC AACATCGATC CTGTTCTTCA GGAGCCGCGA AACACAAGCC GGATGTTCCT GTGGGATGGA CGTGAGGCGC GAAGCGCTAA GTCGCCGAAA GAACGCCGTC TGTTTGACGA TGCGCTCAGC TTCAAGATCA GGACCGGCCT GACCGTTCGC ATTCCCTCAA GCCAAAACCA GTTCGCGGCG TTCACGCTCG CGGCGGACGA CCGCAGCCTT GGACTCGATC GTTTCATCGA GACCTCGCAA GACATGTTGG AAATGGTGGG TCTCACCTAT CATGCGCATG TGAGCGCCGC CAGAATCGGA CGCACGCCCC CGGACGGTCA GCAGGGGAGC CCGCTGACTC AGCGCGAACG GCAGTGTCTC GCCTGGATAT CTGACGGCAA GACAATGCAG GATATTGCGG AGCTTCTCGG GGTTTCGCCG CGAGGGGTGA AGTTTCATCT GGATAATGCC AGGCGAAATC TTGCTGCACT CACCCTTCCA CACGCTGTGG CCCTCGCGTT TCGGCAGGGA TTGCTCCCAT AA
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Protein sequence | MKGVKRACDE FVDCLHSAHT EEDFRRVAER TAHALGFRWF AYFGHRANGP KLISSYPKSW TSHYFREGYD NIDPVLQEPR NTSRMFLWDG REARSAKSPK ERRLFDDALS FKIRTGLTVR IPSSQNQFAA FTLAADDRSL GLDRFIETSQ DMLEMVGLTY HAHVSAARIG RTPPDGQQGS PLTQRERQCL AWISDGKTMQ DIAELLGVSP RGVKFHLDNA RRNLAALTLP HAVALAFRQG LLP
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