| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_p0250 |
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| Symbol | avhB9 |
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| ID | 5148603 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009475 |
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| Strand | - |
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| Start bp | 183172 |
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| End bp | 184023 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640539126 |
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| Product | Type IV secretory pathway AvhB9 protein |
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| Protein accession | YP_001220559 |
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| Protein GI | 148241058 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3504] Type IV secretory pathway, VirB9 components |
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| TIGRFAM ID | [TIGR02781] P-type conjugative transfer protein VirB9 |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.729526 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCCT TCGTTCTCTT ATTGATTTTT GCCCTGGGAT TCGCAGGGCC GGTGCTGGCG
CTGCAACAGC CCTCGCCAGG CCAACACGAC GCCCGGGTGC GCACCGTGAC CTATGATCCG
GCCAATGTGG TCCGGGTCAA CGGCGTGATT CGGGCATCCA CCCAGGTGTT GTTTGCCGAC
GATGAGGAGG TCGCGCATGT CGCGATTGGC GATGCGATCG CATGGGAAGT TGCACCAGCG
GGCTCGATCC TGTTCCTCAA ACCGCGGGAA AAACATCCGC CGACCAACCT GCAGGTCGTC
ACCACGCGCC CGGATGGCCG CAAGCGCTCG TATCAGTTCG AGTTGTCGAT CGCCGAGACG
ACGCTGGCGG ACAGCTATTT CGTCGTCCGC TTCGCCTATC CCGGCGACGA GATCGAGCGT
CGGCGTGCGG AGGCGGCCGC CCGTGGCGCG GAGCGGGAAG GCTCGCTGAT AGACCAGACC
TTTGACCTGC ATCATGCGTA TGGGGCACGC AACTGGCGGT TTTCGGCACA AGGCTCGGTC
GACCTCGAGC CCGAAGCCGT TTTCGACGAC GGCAAGGAGA CCACGTTCCG CTTTGCGGGC
AACCGTGAAA TCCCCGCGAT CTACCTAATC AATTCCGACG GCTCCGAAAG CCTGGTGCCC
AAGGATGTCC GCGGCGAGCT CGTGGTGGTT CATGCCACGG CCCGGGAGTT CCGGCTGCGC
AAAGGCGACA ACGTCCTTTG CATTTTCAAC GAAGCGTTCG ATGCGGTGGG GATTAACCCT
GGGACCAATA CCACAAGCCC CTCGATCGAG CGGCGGGCAA AGAAATCATC TCCAATCTCA
AGGCCACGAT AG
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| Protein sequence | MKSFVLLLIF ALGFAGPVLA LQQPSPGQHD ARVRTVTYDP ANVVRVNGVI RASTQVLFAD
DEEVAHVAIG DAIAWEVAPA GSILFLKPRE KHPPTNLQVV TTRPDGRKRS YQFELSIAET
TLADSYFVVR FAYPGDEIER RRAEAAARGA EREGSLIDQT FDLHHAYGAR NWRFSAQGSV
DLEPEAVFDD GKETTFRFAG NREIPAIYLI NSDGSESLVP KDVRGELVVV HATAREFRLR
KGDNVLCIFN EAFDAVGINP GTNTTSPSIE RRAKKSSPIS RPR
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