| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_p0197 |
|---|
| Symbol | |
|---|
| ID | 5148549 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009475 |
|---|
| Strand | + |
|---|
| Start bp | 150475 |
|---|
| End bp | 152229 |
|---|
| Gene Length | 1755 bp |
|---|
| Protein Length | 584 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640539094 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001220527 |
|---|
| Protein GI | 148241026 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG3243] Poly(3-hydroxyalkanoate) synthetase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGACTT CGATCGCCAA TCAGCTCGCG CGCCCTGAAC AATTTACCTC AAAAACGATT
GGCCCATCTT CAGAAGGTCA AGCAGCGAAC TCCGTCTCGA ATACCATTCC TAGCCTATCG
GAATTTTGGG ACTATCAGCG GGATGTCTGG GAACGGACAA TCCTGTTTTG GGACACGCTT
CGAGAACGCG GCGACAATGC ACTCGATCAC GAACGGATGG GATTACCGCC GTTACTCGAT
TTCAAATACG AGACAATCCT GGACGCGAGA ACTTTTACCC GACCGGTTAA CTACGTTCTG
TTGCGGATCC TGCCGCCGGA ATCTGCCAGC GAACGACATT GTACGGTCCT GGACCGTCCG
CCGGTCATCG TCGTAGATCC GCGCGCGGGT CATGGCCCGA GCATCGGCGG ATTTAAGCAC
GATTCGGAGG CCGGCGTTGC GCTCGATGAA GGTTATCCGG TCTATTTCGT TTCGTTTTTC
CCTGAGCCAT GCCAAGGGCA AACGCTCGCT GACGTCCTGC ACACCTTGCG ACGGTTTGTT
GAGGCCGTGC GGGCCCGTCA TCCCGACCAG CCTCCGATTC TCTACGGAAA TTGCCAGGCG
GGCTGGGCCG TGACGCTTCT CTCCGCTGAC TGTCACGGTC TCGTGGGCCC CGCCGTACTC
AACGGCTCTC CGCTCTCGTA CTGGTCGGGA GAAGCAGGCG TCAATCCGAT GCGCCTTTCG
GCAGGCTTCA ACGGCGGAGC CTGGCTCGCT CATTTGATGG CAGACTTCGG CGACGGACGG
TTCGACGGCG CCTGGCTCGT TCAGAATTTC GAGAATCTCA AGCCTGAATC CGTTTGGGAT
AAGTACGCCG GCCTGTTCAC TGATATTGAT CATGAACGTG AACGCTTTCT CTCGTTCGAA
CGCTGGTGGA ACGGCTACTA TTTCCTGAGC CGGGAAGAAA TTTTGTCCAT CGTCGAAAAT
CTGTTTGTCG GAAATCAACT GGAACAAGGC CTATTTCGAA TCTGCGGCGG TTGTGTCGCC
GATCTGCGGC GCATTCGCAA TCCGATCGTC ATTTTCGCTT CGTATGGAGA CAATATCACC
CCGCCCCATC AAGCCCTCGG CTGGATACCA GCGGTTTACA AGAGCACAGA AGATCTGCAG
GCGGCCAAGC AAAGGATCGT TTATCTAACG AACCCGCATG TTGGCCATCT CGGGATCTTC
GTATCAGGGG CGGTTGCCCG CTTTGAACAC CGCGCCATCT TGGAGCATGT CGGAGAGATC
GAGAGCCTGA GTCCGGGCTT GTATGAAATG ACGATCGAAA ATCCAGCCGG CGACCCGGAA
TGTCGCAAGC CCTATTACAC TGTCCGGTTT GAGCCGAGAC GCGTCGAGGC CCTGCATTTT
CCCGACAATC GAGCTGCCCT GAAGCGCGTG CAGCAGATCT CGGAGGCGAC GGAAACGCTT
TACCGGACCT TCCTTAGCCC CTGGGTCCAA GCGGTTTCAA ACCCGTGGAC TGCCGACATG
GCGAAGTGGC TGCATCCGAT GCGGATGAGC CGATACATGA TTTCGTCGGC GTTCGCGCCG
GGTCTTCGGG CTCTCAGCGG AGCCGCTTCC GCTATCGCTC AGCGCCGTCA GCCGCTTCCT
GCAGATCATC CAATGATAAA GAAGGAGCAC GATTTTATCG CCGACACGAC AAAGATGTTG
GAGCTATTTC GGAAGCAGCG AGACGCAGCC CTGGAGAAGA CGTTTGACCT GACATATCGG
TCGTCCTCTG AATGA
|
|---|
| Protein sequence | MPTSIANQLA RPEQFTSKTI GPSSEGQAAN SVSNTIPSLS EFWDYQRDVW ERTILFWDTL
RERGDNALDH ERMGLPPLLD FKYETILDAR TFTRPVNYVL LRILPPESAS ERHCTVLDRP
PVIVVDPRAG HGPSIGGFKH DSEAGVALDE GYPVYFVSFF PEPCQGQTLA DVLHTLRRFV
EAVRARHPDQ PPILYGNCQA GWAVTLLSAD CHGLVGPAVL NGSPLSYWSG EAGVNPMRLS
AGFNGGAWLA HLMADFGDGR FDGAWLVQNF ENLKPESVWD KYAGLFTDID HERERFLSFE
RWWNGYYFLS REEILSIVEN LFVGNQLEQG LFRICGGCVA DLRRIRNPIV IFASYGDNIT
PPHQALGWIP AVYKSTEDLQ AAKQRIVYLT NPHVGHLGIF VSGAVARFEH RAILEHVGEI
ESLSPGLYEM TIENPAGDPE CRKPYYTVRF EPRRVEALHF PDNRAALKRV QQISEATETL
YRTFLSPWVQ AVSNPWTADM AKWLHPMRMS RYMISSAFAP GLRALSGAAS AIAQRRQPLP
ADHPMIKKEH DFIADTTKML ELFRKQRDAA LEKTFDLTYR SSSE
|
|---|
| |