| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_p0180 |
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| Symbol | hupS |
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| ID | 5148531 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009475 |
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| Strand | - |
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| Start bp | 135813 |
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| End bp | 136790 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640539079 |
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| Product | uptake hydrogenase small subunit |
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| Protein accession | YP_001220512 |
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| Protein GI | 148241011 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1740] Ni,Fe-hydrogenase I small subunit |
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| TIGRFAM ID | [TIGR00391] hydrogenase (NiFe) small subunit (hydA)
[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCAGCT CAGACGCCCG CCCATCCATA TACGATGATC TGAAGCGGCA AGGCGTCTCG
CGGCGGAGCT TTATTAGCTA TTGCACATAT ATGGCCTCGC TATTGGCGCT ACCTCCTAGC
GCGGCGCAAG CAATCGCGGA TACTCTAACA AACAAGTCCC GTCCAAGCGT GATATGGCTC
TCGGTCCAGG AATGCACTGG CTGCAGCGAA TCGTTGCTCC GCTCGTTTGA ACCGACGCTC
GAGGGGTTGA TCTTCGACCA ATTTTCGCTT GACTACCATC ATGTGCTGCA GGCGGCCGCG
GGAATCGCGG CCGAGCGGGC GCGCGATCAA GCTATTGAGA GAAATTTCGG CAAGTACGTG
TTGATCATCG ATGGCGGCAT TCCGACCGGT CGATCCGGCG TGCTCTCGAC CACGGGTGGA
AAAAGCGGGG TAGAGCTCAT CCGGGCCGCA GCGCGCGGCG CAGCGCTCAT CGTCGCGGTA
GGTTCATGCG CCGCCTATGG CGGTATTCCG GCAGCGGCGC CAAATCCTAC GAACTCTGGC
GGCGCCCTTG ATGCATTGCG CGACTTGATC GATCAGGGTG CGGTAACGGC GCCCATCATC
AACGCGCCGG GCTGTCCCCC GGTGCCGGAA GTCATGACCG GTGTCATCGT CTACTTCCTG
ACCTACGGCA AGTCACCGCC GCTCGATGAT CTCAGCCGAC CTATACCTTT CTTCGGGCGC
ACTGTGCATG ACGACTGCCC TCGGCTGCCA TTCTTCGATC AAGGCCTGTT TGCGAAGACC
TTCGACGATG AGGGCGCCCG GAGAGGATAT TGCCTTAAGG ATCTCGGCTG CAAAGGCCCG
ACGACCTTTA ATGCCTGCAC CACCGTGAAG TGGAATCAGA AGACCAGTTT TCCCATGCTG
TCCGGCCATG GCTGCCTCGG CTGCGCGCAG CCAAAATTTT GGGATCGTGA AGGGGGATTC
TATGGCAAGC TCTTCTGA
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| Protein sequence | MSSSDARPSI YDDLKRQGVS RRSFISYCTY MASLLALPPS AAQAIADTLT NKSRPSVIWL
SVQECTGCSE SLLRSFEPTL EGLIFDQFSL DYHHVLQAAA GIAAERARDQ AIERNFGKYV
LIIDGGIPTG RSGVLSTTGG KSGVELIRAA ARGAALIVAV GSCAAYGGIP AAAPNPTNSG
GALDALRDLI DQGAVTAPII NAPGCPPVPE VMTGVIVYFL TYGKSPPLDD LSRPIPFFGR
TVHDDCPRLP FFDQGLFAKT FDDEGARRGY CLKDLGCKGP TTFNACTTVK WNQKTSFPML
SGHGCLGCAQ PKFWDREGGF YGKLF
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