| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_p0179 |
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| Symbol | hupL |
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| ID | 5148542 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009475 |
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| Strand | - |
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| Start bp | 134030 |
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| End bp | 135742 |
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| Gene Length | 1713 bp |
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| Protein Length | 570 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640539078 |
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| Product | uptake hydrogenase large subunit |
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| Protein accession | YP_001220511 |
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| Protein GI | 148241010 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0374] Ni,Fe-hydrogenase I large subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTCGATC CGGTCACGCG TATCGAAGGC CATCTCCGCA TCGAGGCGGA GACGGATGCG
CAGGGCAACA TCACTCGAGC ATCGAGCTCC GGGACGATGG TTCGCGGCAT CGAAGTGATC
CTGAAGGGGC GTGATCCGCG GGATGCTTGG GCATTTACGC AGCGGTTCTG CGGCGTGTGC
ACGGTCGTAC ACAGCATCGC CTCGGTACGC GCGGTCGAAT ATGCCCTCGG TTACGTCATC
CCGCAGAACG CGCAGCACAT TCGAAATCTC ATGATCGCCG CGCAGTTCGT ACACGACCAC
GTCATGCACT TCTACCATCT ACATGCTCTG GACTGGGTCG ACATCGTTTC GGCGCTGAAG
GCGGATCCGG CAGCCACCGC GAAGCTTCAG ACCACCCTAA GCGCATGGCC GAACAATTCC
GCCGAATATT TTCGGAGCAC CCAACAGAAG CTCAAGGGCT TCGTGGAAGG CGGTCAGCTC
GGCATCTTTA CCAACGGCTA TTGGGGGCAT CCGGCATACA AGCTGCCGCC CGAGGTCAAT
CTGCTCGCCG TAACGCACTA TCTGGAAGCG CTTGCCTGGC AGCGCGATGT CGTGAAGATT
CACGCCATAT TCGGTGGCAA GAACCCGCAT CCTAATTTCG TGGTCGGCGG CGCACCCTGC
GCGATCTCGG AGACGGCGCA CGCGACCGCG GTGACACCCG ACAACCTGCG TTTTGTCGGA
GAGATGATCG GCAAGATGCG GTCCTTCGTC GATCAAGTGT ATTTGCCCGA CACGCTTGCG
ATCGCCGGTT ACTATAAGGA CTGGGCAAGC CGAGGGGAGG GTGTCGGCAA TTTCCTGTCG
TTCGGCGAGT TCCCGCGAGG CGTCGGTGCG GCGGAACGGA CCACCCTACG TATCCCGCCA
GGCGTAATTC TGAACCGCGA CCTGTCGAAG GTGATGTCGG TGGATTTCGA GGATCCGACC
GAGATCCAGG AGTTCGTCGC ACATTCCTGG TACGATTATA GTGCGGGCAA GCAGACTGGC
CTCCACCCCT ACGATGGCGA AACCAACCTC AACTACACCG GCCCGACGCC GCCCTACGAG
CAGCTCGACG TCGACCAGTC ATATTCCTGG ATCAAGTCGC CGCGCTGGAA GGGATTGCCG
ATGGAAGTGG GGCCCCTCGC ACGCGTGCTG ATCTTGTACG CGAGCGGCGA CCGGGCAACC
CGCGGTCTCG TCGATCACAG CCTGGGCCGG CTGGACCTGC CGGTCTCAGC TCTCTTTTCG
ACGCTTGGCC GCATCGCCGC CCGGACGCTG GAAACAAAAT TGATCGCCGA CGAAATGAGC
GGGATGTACG ATGCACTGAT TGCCAGGATT GCGAGCGGCG ATCTCGCGAC CTTCAACGAT
CTTCTGTTCG ACCCCTCGAC TTGGCCGAAG CAGGCGCGCG GCGTCGGCGT GATGGAAGCG
CCACGCGGCG CACTCGCCCA TTGGGTGACC ATCGAGGATC GGCGAATCGC TAACTATCAG
GCGGTAGTAC CCAGCACCTG GAATGCCGGC CCGCGCGACA CGGCGGGGCG CGAAGGTCCG
TATGAGGCGG CGCTACGCGG ACATCGGCTC CACGATCCCG CAAAACCGAT CGAAATCCTT
CGCACCATCC ATAGCTTCGA TCCTTGCCTT GCCTGTGCCG TCCACGTCGT CGATCCGCAT
GGCGAAGAGT TGGTACGGGT AAACGTGCTA TGA
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| Protein sequence | MVDPVTRIEG HLRIEAETDA QGNITRASSS GTMVRGIEVI LKGRDPRDAW AFTQRFCGVC
TVVHSIASVR AVEYALGYVI PQNAQHIRNL MIAAQFVHDH VMHFYHLHAL DWVDIVSALK
ADPAATAKLQ TTLSAWPNNS AEYFRSTQQK LKGFVEGGQL GIFTNGYWGH PAYKLPPEVN
LLAVTHYLEA LAWQRDVVKI HAIFGGKNPH PNFVVGGAPC AISETAHATA VTPDNLRFVG
EMIGKMRSFV DQVYLPDTLA IAGYYKDWAS RGEGVGNFLS FGEFPRGVGA AERTTLRIPP
GVILNRDLSK VMSVDFEDPT EIQEFVAHSW YDYSAGKQTG LHPYDGETNL NYTGPTPPYE
QLDVDQSYSW IKSPRWKGLP MEVGPLARVL ILYASGDRAT RGLVDHSLGR LDLPVSALFS
TLGRIAARTL ETKLIADEMS GMYDALIARI ASGDLATFND LLFDPSTWPK QARGVGVMEA
PRGALAHWVT IEDRRIANYQ AVVPSTWNAG PRDTAGREGP YEAALRGHRL HDPAKPIEIL
RTIHSFDPCL ACAVHVVDPH GEELVRVNVL
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