| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_p0173 |
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| Symbol | hupD |
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| ID | 5148647 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009475 |
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| Strand | - |
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| Start bp | 129946 |
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| End bp | 130458 |
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| Gene Length | 513 bp |
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| Protein Length | 170 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640539072 |
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| Product | hydrogenase maturation protease |
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| Protein accession | YP_001220505 |
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| Protein GI | 148241004 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0680] Ni,Fe-hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00072] hydrogenase maturation protease
[TIGR00140] hydrogenase expression/formation protein |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTTGCG CGCTTCAGGC TGAGCAACGT CCCGGTGTGA CCATACTTGG CGTGGGAAAT
ACCCTGCTCG CCGATGAGGG AATCGGTGTT CACGTCGTAC GGCGGCTGCA AGACCTCGCT
GGAGACTGCG ACGATATCGA GCTAGTCGAT GGCGGAACCC TGAGCTTTAA TCTCGTTCCG
GTCATTGAAG CGGCCAAGCG CCTGATCGTC ATTGATGCCG CCAATCTCGG CAGTTCGCCG
GGCTCGTTCC GTTGTTTCGT CGGAGACGAA CTGGATCGGT TCCTTGGAAG CTCAAAGCAC
ACCGCGCACG AGGTCGGGCT ACGAGAATTG TTTGATATGG CGCGCCTTGA TGGTTGTCTA
CCAAGTCACC GAGCGCTGAT CGGGATTCAA CCGCTGCGCA TCGATTGGGG CGAGGAGCCG
ACTTCGCCGG TCGCTGCTGC GATTTCGCAG GTGTCTGGTC TCGCCATTCG CTTAGCGAGG
CAGTGGTGCG ATCGGCCAGT CGAGGACGTT TAG
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| Protein sequence | MTCALQAEQR PGVTILGVGN TLLADEGIGV HVVRRLQDLA GDCDDIELVD GGTLSFNLVP
VIEAAKRLIV IDAANLGSSP GSFRCFVGDE LDRFLGSSKH TAHEVGLREL FDMARLDGCL
PSHRALIGIQ PLRIDWGEEP TSPVAAAISQ VSGLAIRLAR QWCDRPVEDV
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