Gene BBta_p0123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_p0123 
Symbol 
ID5148723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009475 
Strand
Start bp92075 
End bp92809 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content59% 
IMG OID640539037 
Productputative flagellar basal-body rod protein flgF 
Protein accessionYP_001220470 
Protein GI148240969 
COG category[N] Cell motility 
COG ID[COG4786] Flagellar basal body rod protein 
TIGRFAM ID[TIGR02490] flagellar basal-body rod protein FlgF
[TIGR03506] fagellar hook-basal body proteins 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGAGA CCACGACAAT TCATCTGTCG AGACTGATCG CGCTGGAACG CAGGCTGGAC 
AACGTTGCCA ACAATGTTGC CAATGCTGAC ACGACCGGCT TTCGCGCGCG CCAGCTTTCC
TTTCAGGAAT ATCTCTCGCC GGCGAAGGAG GGCGAAGCCA ACGGAAAAAG GGAGCGCCCC
GTCTCATTGG TCAACGCCGG ACTCCAGTAT CCGGATTCCG CAGGAGGCGC AATTCAACTC
ACCGGCAATC CTCTCGACGT AGCCATCGTT GGAGACGGGT ATTTTGCCGT CCAGACGCCG
CAGGGTGAGC GCTACACGCG GGCCGGCTCG CTTACCACGG ATGCCACGGG ACGCCTGGTC
ACGATGGATG GCCTGCCGAT CCTCTCCCGG ACCGGTCCGA TCACGGTCGC ACCCGGAGAG
CGCTCATTGA CGATCGCTTC GGACGGCACC ATCAGTTCCA GCCAGCGGAC TATCGGCAGT
CTCCGCCTCG TTCGTTTCGA CGGCCCGCTG CAAGCGATGG GCTCCAACCT TTTTGAGAGC
AGGTCTCCTG CTCTCAATAT TCCGACGGGG TCGGTAAAAC TCTTGGTCGG AGATTTGGAG
AAGTCCAACG TCCAAAACGT CCAGGAGATG AGCCGATTGA GCGAAGTTAC CAGGTCCTAC
GAACAGGTGG GTGGGCTACT CAAGAATTCG CAGAACGTCG ATGATCTCAA CAAGCTGGGA
TCCGTCCCCG ACTGA
 
Protein sequence
MGETTTIHLS RLIALERRLD NVANNVANAD TTGFRARQLS FQEYLSPAKE GEANGKRERP 
VSLVNAGLQY PDSAGGAIQL TGNPLDVAIV GDGYFAVQTP QGERYTRAGS LTTDATGRLV
TMDGLPILSR TGPITVAPGE RSLTIASDGT ISSSQRTIGS LRLVRFDGPL QAMGSNLFES
RSPALNIPTG SVKLLVGDLE KSNVQNVQEM SRLSEVTRSY EQVGGLLKNS QNVDDLNKLG
SVPD