Gene BBta_p0093 details

Gene Information

• Locus tag: BBta_p0093
• ID: 5148569
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Bradyrhizobium sp. BTAi1
• Kingdom: Bacteria
• Replicon accession: NC_009475
• Strand: -
• Start bp: 67991
• End bp: 70003
• Gene Length: 2013 bp
• Protein Length: 670 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 640539014
• Product: putative NADH oxidoreductase; putative nitric oxide dioxygenase
• Protein accession: YP_001220447
• Protein GI: 148240946
• COG category: [C] Energy production and conversion
• COG ID: [COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 9
• Fosmid unclonability p-value: 0.303734
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGGATTTC ATGAACAACC GGGAGGCTTG ACCGCCGTTT CATGGTTTCT GGCTGTCGCA 
TTCTTGGTCA TCTCGGTGTC GCGGGCGCCC GCGCAGATGG AAGGAGGGCA CGGCGCCCCC 
CATTCCGAGA TGTCTGTTCC GCCTACTCCT TCTCCCAACC AGCGCGGCCT TGGGATGCCC 
GGCATGGGAG AAATGGGCAG TGGCGCGATG GGCGCGAGCC CCCGCGGCGA GATGGGCGGC 
AGTATGGGAG AGATGGGGGG CATGGGTGAG ATGGGGCGCC GCCCCGCGAA GGAGTTTTAT 
CCCTCCCTGA TGAACTTGCC GACGTTGTCG GCCGAGCAGC GCCGCATGAT CGAGGCACAG 
GCCCAAGCTC AAATCACGAA TGGCACGACC GAGATCGCCA ACGCGGAAAG TGCGCTTCGC 
CAAGCCAGGT CAGCGGGAGA CTCCGCCGCT GTCGAACAGG CCGCGGGCCG GCTGCGCGAC 
GGACTGAGCA ATGTCAAGAG CGGCGCAACG ACGCTTCGCG CCCTTGCCGA AGGCAAATCG 
CCACCGCAAA TTGCGCAGGC CTGGTTCAAG TCTCAGCTAA GCATCCCTTC CGCGACGGCA 
AGCGACAGTC TTTCGGCGCT CGGCCTGTCT TGGTTTCATG TGATTACGAT GGCGGTGGTG 
GCGACATTCG CAACAGCCAT GCTTGCGATC TACTTCTTGC GCATGCGCCG CGCCAGCGCC 
TTGGTCGAGC GTCTGACACG TGTCCCGGCA GTCGCAGCTT CCTCGGGGAG GCCTCCCATC 
CCCTTGACTG CTGCGTCGAA AATCCCCCCA GGCAGCACGC CGGCTACGGG TCCGGGATCA 
ACATCTGCGC CCCCCGCCGC TGCAGAGGCG CGACCTGAAC CTTTATCTTT TCCTGCAGCC 
CGTACAACCA CCGCAAACGC GGGGCCATGG AAAGGAAAGC TTCGGGTCGC CGCAATCTTT 
CCTGAAACAA AGGACGTGAA AACGTTCAGG CTCAAAAATC CGGATGGCGG GCCGGTTCCG 
TTCAGCTTCC TGCCGGGCCA ATTCCTCACC TACTCGGCGG AGATCGATGG CAAGCTCGTC 
CGGCGATCCT ACACGATTGC GTCATCGGCT GCACAAAGCG CCTATGTCGA GACCACGATC 
AAGCGCGAAG AACCGGGAAT TTTCTCCGAC TACATGCATG ACAAGGTGGT CGAAGGCGAT 
CTGCTCGAGG TGGCCGCGCC GTCAGGCACG TTCACCTTCA CCGGCAAGGA AGCGGACAGC 
GTGGTGTTCA TCGGAGGCGG TGTCGGCATT ACGCCGCTGA TGGCTGCAAT CCGGTATCTG 
TTTGATACGA CCTGGAAGGG TGAAACATTT CTCGTCTACG GGGCGCAGAG CACGGCGCAT 
TTCATCTTTC GCGACGAGCT CGAATATCTC CAGCGCCGGA TGCACAACCT TCATGTCGCA 
GCCACCATGG CGCGTGCGGC CGGCACGTCC TGGATGGGGG CCGAAGGACA CATCACCAGG 
GAGTTTCTAC TTCAGTCCGT GCCCGAGATT ACCAGCCGGC GCGTCCACCT CTGCGGACCG 
CCCGGCATGA TGCAAGCGAT GAAGAAGCTG CTCGCCGAAC TCGGCGTCCC GCCTGACCAG 
GTCAAGACCG AGGCCTTCGG GCCGGCGCGC GGCGCCGTGC CGCCCCCGGG CGTCACCCAG 
ATCGTGCAAG GCGGAGCCGC AGGTAGCGGT GCCGGCGCCT TGCAACCCAC GGCACCGGCG 
ATTGGGCCCG CAACCGCCAC CATTCGCTTT GCGAAATCGG ACAAGCTCGT TCCCCTGCCG 
CCGGACAAGA CTGTGCTCGA GGTCGCGGAG TCCATTGGCG TACCCATCGA TTATTCCTGC 
CGGATCGGGA TCTGCGGCAC CTGCAAGACA AAACTTCTCG AAGGCAAGGT GACTATGGAG 
GTCGAGGAGG CGCTCACACC CGAAGACAAG GCGCAGAACA TCGTCTTGGC TTGCCAAGCC 
AAATCGGTCG GCAATCTGGT CGTCGAGGCC TGA 

 

Protein sequence

MGFHEQPGGL TAVSWFLAVA FLVISVSRAP AQMEGGHGAP HSEMSVPPTP SPNQRGLGMP 
GMGEMGSGAM GASPRGEMGG SMGEMGGMGE MGRRPAKEFY PSLMNLPTLS AEQRRMIEAQ 
AQAQITNGTT EIANAESALR QARSAGDSAA VEQAAGRLRD GLSNVKSGAT TLRALAEGKS 
PPQIAQAWFK SQLSIPSATA SDSLSALGLS WFHVITMAVV ATFATAMLAI YFLRMRRASA 
LVERLTRVPA VAASSGRPPI PLTAASKIPP GSTPATGPGS TSAPPAAAEA RPEPLSFPAA 
RTTTANAGPW KGKLRVAAIF PETKDVKTFR LKNPDGGPVP FSFLPGQFLT YSAEIDGKLV 
RRSYTIASSA AQSAYVETTI KREEPGIFSD YMHDKVVEGD LLEVAAPSGT FTFTGKEADS 
VVFIGGGVGI TPLMAAIRYL FDTTWKGETF LVYGAQSTAH FIFRDELEYL QRRMHNLHVA 
ATMARAAGTS WMGAEGHITR EFLLQSVPEI TSRRVHLCGP PGMMQAMKKL LAELGVPPDQ 
VKTEAFGPAR GAVPPPGVTQ IVQGGAAGSG AGALQPTAPA IGPATATIRF AKSDKLVPLP 
PDKTVLEVAE SIGVPIDYSC RIGICGTCKT KLLEGKVTME VEEALTPEDK AQNIVLACQA 
KSVGNLVVEA