| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_p0088 |
|---|
| Symbol | |
|---|
| ID | 5148580 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009475 |
|---|
| Strand | - |
|---|
| Start bp | 64028 |
|---|
| End bp | 65113 |
|---|
| Gene Length | 1086 bp |
|---|
| Protein Length | 361 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640539009 |
|---|
| Product | transaldolase |
|---|
| Protein accession | YP_001220442 |
|---|
| Protein GI | 148240941 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0176] Transaldolase |
|---|
| TIGRFAM ID | [TIGR00876] transaldolase, mycobacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.40765 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAGCAA TCAAGACGCT TCGTGATCTC GGCCAGAGCC TATGGCTCGA TAACATCACA
CGAGACTTAC TGCGGAACGG GACGCTGCAG CGCTATATAG ACGACTTTTC GGTGTCCGGA
CTTACGTCCA ATCCCACGAT TTTCGAGCTA GCCATCAAGA ACAGTACGAT GTACGACGCC
GATATCGCTC TTCGGTCGCC GTCGATCCAA TCGGGCGAGG ACCTGTTCTT CGACTTGGCG
CTCGCGGATC TGACTGGCGC TGCCGAACTA CTCCACCCCG TATTTGCTCG CACCGACGGT
GTGGACGGCT GGGTGTCGCT CGAGATTTCG CCCCTTCTGG CCCACGATAC TAACCGCACG
CTGGCGGCCG CGAGCGATCT TCACCGCCGT GCCGGTAAAC CCAACCTCTT TATCAAGATT
CCCGGCACTC CAGAGGGACT GCCGGCCATC GAGGCGGCAA TCTTTGCCGG CATTCCCGTG
AACGTCACCC TGCTTTTCTC GCGCGAGCAG TATCTTGCCG CGGCCGATGC CTATCTGCGC
GGCGTCGAGC GGCGCATCGC GGCGGGGCTC AATCCGGCAG TTGCCTCAGT CGCCTCGCTG
TTCGTCAGCC GCTGGGATGC CGCGGTTGCC GGCAAGGTCC CAACTGATTT GACCAACCGG
CTCGGCATCG CCGTCGCTCA GCGCACCTAT AAAGCTTACC GTGAATTGCT GTCCTCGGCG
CGTTTCCAGC GCGCCGCCAA CGCCGGCGCT CGCCCCCAGC GTCTGCTATG GGCCAGCACT
GGCACAAAGG ACCCCAAAGC CTCTGACATC CTCTATGCCA AGGCGCTGGA AGCCCCGCTC
ACGATCAACA CCATGCCTGA GGGCTTGCTC AAGGCTTTTG CCGATCACGG CGAGGTGGGC
GAGATCCTGG CGCCCGACGG GGGCGACTGC GAAGCGGTTC TCGCCCGTTT CGCTAATATC
GGCATCGACA TCGACGCGCT CGCCACGCGA CTGCAGGACG AGGGGGCTGC ATCCTTCGTA
AAATCCTGGA ACAACCTGAT GGACCGCATC AAGACCAAGA TGGACCTGAG GCGGGCGACG
GTTTGA
|
|---|
| Protein sequence | MRAIKTLRDL GQSLWLDNIT RDLLRNGTLQ RYIDDFSVSG LTSNPTIFEL AIKNSTMYDA
DIALRSPSIQ SGEDLFFDLA LADLTGAAEL LHPVFARTDG VDGWVSLEIS PLLAHDTNRT
LAAASDLHRR AGKPNLFIKI PGTPEGLPAI EAAIFAGIPV NVTLLFSREQ YLAAADAYLR
GVERRIAAGL NPAVASVASL FVSRWDAAVA GKVPTDLTNR LGIAVAQRTY KAYRELLSSA
RFQRAANAGA RPQRLLWAST GTKDPKASDI LYAKALEAPL TINTMPEGLL KAFADHGEVG
EILAPDGGDC EAVLARFANI GIDIDALATR LQDEGAASFV KSWNNLMDRI KTKMDLRRAT
V
|
|---|
| |