| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_p0053 |
|---|
| Symbol | aapQ |
|---|
| ID | 5148649 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009475 |
|---|
| Strand | + |
|---|
| Start bp | 35185 |
|---|
| End bp | 36300 |
|---|
| Gene Length | 1116 bp |
|---|
| Protein Length | 371 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640538980 |
|---|
| Product | amino acid ABC transporter permease protein precursor |
|---|
| Protein accession | YP_001220413 |
|---|
| Protein GI | 148240912 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4597] ABC-type amino acid transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCAACG ATGCCAGGAC GAGATCGATC GTCATTCAAT GCGTCTTGGT GGCGGCTGTC
GTTGGCGCTG CGGCCCTGCT CGTCACCACA ACCTTCACGA ACCTGCAGAC GCGCGGCATT
CCGATCGGGT TCGACTTCCT GTCGATGCCA TCCCGGATCG TGATCTCCGA GGCGATCCTC
TCCTACAAGT CGCGTGATCC CTATTACTGG GCCATCGTCG TCGGACTGGC GAATACGGTT
TTTGTTTCCG CGCTCGTCAT CGTCTTCTCG TCGGTCCTCG GTCTCGTCGT CGGCGTCACC
CGGCTGAGCA GCAATCCGCT CGCCGCCGGC ACCTGCCGGG TCTGGGTGGA GATCGCGCGG
AACTCGCCGC CAATCGTCCT GCTGATCTTC CTCTACTCGC TCTGGTGGAA GGTCCTCCCG
CCGGTCGCCG ACGCGCTCCG TCCGCTTCCC GGCGTTTTCG CCTCGATGCG CGGCCTCATG
GTCCCAAGCG TTCACATCAG CCTAGCAACA GCAGGCGTGG TCCTGATCAT CGTTGCCGGG
ATGCTCTTCC TCGCTCCTCG GCTCGCAGGT TCGCTGCGCA ACTTCCGGCC CGCCCTGAAC
TGGGCCACGG TTGCCGTTCT TTTGCTCGGC CTTTGGTTCG CCGATGCCAC TGTCTCGATG
GATTGGCCCG TCTTCGCGGG TTCGAACTTC CAGGGCGGGC TGGAGCTGAC GCCGGAGCTC
AGCACCATCC TGATCGGTCT GACGATCTAT ACGACCGGCT TCATCGCCGA GATCGTGCGA
GGCGGCGTGC TGTCGGTCGG GTCCGGGCAA TGGGACGCCG GCCGCTCGGT CGGCCTGTCA
AGGTCCAAGA TCCTGCGGCT AATCGTGATC CCGCAGATGC TGCGCGTGAT CGTGCCACCA
CTCAACAGCC AGTACATCAA CGTCGTCAAG AATTCGACGC TGGCGATCGC TGTCGGCTAC
CCGGATTTCT TCGCGGTGAT GAACACCATC ATCAGCAAGT CCAGCCATTC GATCGAAGGC
GTCTTCATCA TCCTGGGCGT CTACCTCGCC CTGAACCTGA CCCTGTCAAG CGCGGCCAAT
TGGTACAACC GCCGCATCGC GATCGTGGAA CGTTGA
|
|---|
| Protein sequence | MFNDARTRSI VIQCVLVAAV VGAAALLVTT TFTNLQTRGI PIGFDFLSMP SRIVISEAIL
SYKSRDPYYW AIVVGLANTV FVSALVIVFS SVLGLVVGVT RLSSNPLAAG TCRVWVEIAR
NSPPIVLLIF LYSLWWKVLP PVADALRPLP GVFASMRGLM VPSVHISLAT AGVVLIIVAG
MLFLAPRLAG SLRNFRPALN WATVAVLLLG LWFADATVSM DWPVFAGSNF QGGLELTPEL
STILIGLTIY TTGFIAEIVR GGVLSVGSGQ WDAGRSVGLS RSKILRLIVI PQMLRVIVPP
LNSQYINVVK NSTLAIAVGY PDFFAVMNTI ISKSSHSIEG VFIILGVYLA LNLTLSSAAN
WYNRRIAIVE R
|
|---|
| |