| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_p0034 |
|---|
| Symbol | |
|---|
| ID | 5148674 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009475 |
|---|
| Strand | + |
|---|
| Start bp | 24874 |
|---|
| End bp | 26283 |
|---|
| Gene Length | 1410 bp |
|---|
| Protein Length | 469 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640538970 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001220403 |
|---|
| Protein GI | 148240902 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4487] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.907234 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACGAGA TCATCTGTCC CCACTGTGAC AAGGCCTTCA AAGTCGATGA ATCCGGGTAC
GCTGAGATCC TGAAGCAGGT CCGTGACGCC GATTTCGCAA AGCAACTGCA CGAGCGGCTG
GAGTTGGCCG AGCGCGACAA ACAGGGCGCT GTTGAATTGG CCAAAGCCCA GGTCAGCGGC
GATCTGCAGA AGACCGCGGC CGCCAAGGAT GCCGAAATTC AGGAGCTGAA ATCCAAGCTG
GAGGCCAGTG AGGTCTCGCA AAAGCTCGCG GTTACAGAAG CACTGAGTGC TGTCGAAAAG
GAGCGCGACA CGCTGGCGAA CTCGCTCGCG CAAGCGGAAC GGGAGAAGAA GGCTGCCTCC
GAGCTTGCTG AAGCGCTTTT GGCCAGCGAG CAGCACAAGA TCACGGCCGC CAAGGAAAAA
GAAATCCAAG AACTCAAGGC TAAGCTTCAA GCCGTCGAGC TTGAGAAGAA GCTCGCCGTG
ACCGAAGCCG TCGGTGCCAT CGAAAAAGAG CGCGATGAGC TGAAAAACGG GATTAAGCAG
GTCCAGCTTG AAAAGCAGCT CTCCGAGCAA TCGCTGAAGG ACAAGTACGA AACCCAGATC
AAGGATCGGG ACGACGCGAT CGAACGCCTC AAGGATATGA AGGCCCGCCT CTCGACCAAG
ATGGTCGGCG AGACCCTTGA ACAGCATTGC GAGACCGAGT TCAACCGGGT GCGCTCGATG
GCGTTTCCGC GGGCGTATTT TGAGAAAGAC AACGACGCGC GGACCGGTAG CAAGGGCGAT
TACATCTTTC GCGACGCGGA CGAATCCGGC ATCGAGCTCA TCTCGATCAT GTTCGAGATG
AAAAACGAGA GCGACAAAAC AGCGACGAAG AGCAAGAACG AGGACTTCCT CAAGGAGCTC
GACCGCGATC GCACCGAGAA GGGCTGCGAG TACGCGATCC TGGTCTCATT GCTCGAACCC
GACAACGAAC TCTACAATAC CGGTATCGTC GACGTCTTCC ACCGCTATCC CAAGATGTAC
GTCATCCGGC CGCAGTTCTT CCTGCCGATG ATCACGCTGC TGCGGAATGC CTCTCTCAAT
TCCCTGAAGT ACCGGACCGA GCTGGCGCTG GTTAAGGCGC AGAATATCGA CATCACCCAG
TTCGAAAGCC AGCTGGAGAC GTTCAAGAAC GGATTCTTGA AGAACACTGA TCTCGCTTCC
AGGCACTTTC ACACCGCGAT CACGGAAATC GATAAGTCCA TCGACCATCT GCAGAAGACG
AAGGATGCGT TGATCGGCGC TGACCGAAAC CTGCGCCTTG CGAACGACAA GGCGCAGGAC
GTGACGATCA AGAAGCTGAC CCGGGGTAAC CCCACGATGG CGGCGAAATT CGCGGAGCTC
AAGAACCCGC CCGCAGAAGC GGCTGAATAA
|
|---|
| Protein sequence | MHEIICPHCD KAFKVDESGY AEILKQVRDA DFAKQLHERL ELAERDKQGA VELAKAQVSG
DLQKTAAAKD AEIQELKSKL EASEVSQKLA VTEALSAVEK ERDTLANSLA QAEREKKAAS
ELAEALLASE QHKITAAKEK EIQELKAKLQ AVELEKKLAV TEAVGAIEKE RDELKNGIKQ
VQLEKQLSEQ SLKDKYETQI KDRDDAIERL KDMKARLSTK MVGETLEQHC ETEFNRVRSM
AFPRAYFEKD NDARTGSKGD YIFRDADESG IELISIMFEM KNESDKTATK SKNEDFLKEL
DRDRTEKGCE YAILVSLLEP DNELYNTGIV DVFHRYPKMY VIRPQFFLPM ITLLRNASLN
SLKYRTELAL VKAQNIDITQ FESQLETFKN GFLKNTDLAS RHFHTAITEI DKSIDHLQKT
KDALIGADRN LRLANDKAQD VTIKKLTRGN PTMAAKFAEL KNPPAEAAE
|
|---|
| |