Gene BBta_p0007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_p0007 
Symbol 
ID5148715 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009475 
Strand+ 
Start bp5539 
End bp6117 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content63% 
IMG OID640538945 
Producthypothetical protein 
Protein accessionYP_001220378 
Protein GI148240877 
COG category[S] Function unknown 
COG ID[COG5489] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones8 
Fosmid unclonability p-value0.0937165 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGCAC CCATCTGCGT CCTCGATAGA GGCTGGTCTG ACCGAAGGGC GATCCCGCTT 
CGCGGGCTCT CGATCTTGTC CCTGCAACGT CCGTCCTCGA CTTTCTTCCC CTGGCGCTGC 
GCACCATTCC TCGCGGTCCA AGAAAGTCGC TGCCGGCCGC CCTCCATTTC ATTTCGGCCC 
TGTGGGTGCA GGTCGATCGC CTCCGGTCTC ACGACCGCCA TCGAGGTCGC GATAGGCGCG 
GCCCGAGAAA ACCAAGGGTA TGAGACAATG GCTACCATCG GCACCTTCAC CTCCACGGGC 
AATGGCTTCT CTGGCGCTAT CAAGACGCTC AACCTCAACG TCAAGGCCAA GCTGATCCGC 
GTCGACAACC CATCCGACAA GGGACCGCAC TTCCGCATCT ACTCTGGCAA CGTCGAGTTG 
GGCGCCGCCT GGCAGAAGAC CGCCAAGGAC ACCGAGCGCG ACTACCTCTC CGTCAAGCTG 
GACGATCCGA GCTTCCCGGC TCCGATCTAC GCCACCCTGA TCGAAGTCGA AGGTGCAGAG 
GGCGTCCAGC TGATCTGGTC TAGGCCGAAC CGGGACTGA
 
Protein sequence
MGAPICVLDR GWSDRRAIPL RGLSILSLQR PSSTFFPWRC APFLAVQESR CRPPSISFRP 
CGCRSIASGL TTAIEVAIGA ARENQGYETM ATIGTFTSTG NGFSGAIKTL NLNVKAKLIR 
VDNPSDKGPH FRIYSGNVEL GAAWQKTAKD TERDYLSVKL DDPSFPAPIY ATLIEVEGAE 
GVQLIWSRPN RD